RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ARHGEF6Q15052 776 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 DPCR1Q3MIW9 517 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 SPATA1Q5VX52 437 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 CFAP161Q6P656 301 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 IKBIPQ70UQ0 350 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 FASTKD5Q7L8L6 764 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 CCDC105Q8IYK2 499 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 ZCCHC9Q8N567 271 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 WDTC1Q8N5D0 677 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 PDILTQ8N807 584 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 HUS1BQ8NHY5 278 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 ARHGEF2Q92974 986 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 SMARCE1Q969G3 411 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 IL17FQ96PD4 163 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 C1QTNF5Q9BXJ0 243 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 GHITMQ9H3K2 345 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 HCFC1R1Q9NWW0 138 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 CISD1Q9NZ45 108 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 EHD2Q9NZN4 543 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 TBC1D29Q9UFV1 150 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 AGO1Q9UL18 857 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 AAR2Q9Y312 384 aaKnown RBP3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 NFE2L3Q9Y4A8 694 aa3.61□□□□□ -1.83
TMEM50B-208ENST00000474272 AGAP14A8MT82 685 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 J3KR12 359 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 TIMM23O14925 209 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 TIPRLO75663 272 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 SERPINB2P05120 415 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 MMP2P08253 660 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 RARGP13631 454 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 IL7RP16871 459 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 CHATP28329 748 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 HOXD13P35453 343 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 PIGAP37287 484 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 GARSP41250 739 aaKnown RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 MXI1P50539 228 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 ADORA2A-AS1P86434 159 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 GOLGA8DPQ0D2H9 430 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 SNTA1Q13424 505 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 MMEL1Q495T6 779 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 TYW3Q6IPR3 259 aaKnown RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 ANKRD54Q6NXT1 300 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 KLHL24Q6TFL4 600 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 LINGO2Q7L985 606 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 ARHGAP12Q8IWW6 846 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 PGBD5Q8N414 524 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 ZBTB2Q8N680 514 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 BEST2Q8NFU1 509 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 WBP2Q969T9 261 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 HES6Q96HZ4 224 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 PPP1R13BQ96KQ4 1090 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 TIGD1Q96MW7 591 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 SDF4Q9BRK5 362 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 ESRP2Q9H6T0 727 aaKnown RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 EIF2B3Q9NR50 452 aaKnown RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 TMEM51Q9NW97 253 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 FBXO2Q9UK22 296 aaPredicted RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 GPR34Q9UPC5 381 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 LAS1LQ9Y4W2 734 aaKnown RBP3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 LYVE1Q9Y5Y7 322 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 UTYO14607 1347 aa3.6□□□□□ -1.83
TMEM50B-208ENST00000474272 A6NCN8 305 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 ERI2A8K979 691 aaKnown RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 A8MZ25 164 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 TULP2O00295 520 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 AP3D1O14617 1153 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 CLGNO14967 610 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 NKX2-2O95096 273 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 OR2C1O95371 312 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 IPO7O95373 1038 aaKnown RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 LDHCP07864 332 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 CYC1P08574 325 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 DAOP14920 347 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 CDH2P19022 906 aaPredicted RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 PPARGP37231 505 aaPredicted RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 CRIP2P52943 208 aaPredicted RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 NAP1L1P55209 391 aaKnown RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 SORDQ00796 357 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 FOXD4Q12950 439 aaPredicted RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 PRKG2Q13237 762 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 ITGADQ13349 1161 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 OLIG2Q13516 323 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 DRAP1Q14919 205 aaPredicted RBP3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 C2orf68Q2NKX9 166 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 DCAF6Q58WW2 860 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 RHBDF2Q6PJF5 856 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 C9orf139Q6ZV77 190 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 MTSS1LQ765P7 747 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 HAPLN4Q86UW8 402 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 DCUN1D3Q8IWE4 304 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 TTC39CQ8N584 583 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 ZNF114Q8NC26 417 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 OTULINQ96BN8 352 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 SLC41A2Q96JW4 573 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 C1orf74Q96LT6 269 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 SCRT2Q9NQ03 307 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 TERF2IPQ9NYB0 399 aa3.59□□□□□ -1.83
TMEM50B-208ENST00000474272 OR6C3Q9NZP0 311 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms