RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 J3KR12 359 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 K7EM74 188 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 PDE2AO00408 941 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TRAFD1O14545 582 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TEX33O43247 280 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 PRAMEF11O60813 436 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 STK17BO94768 372 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 DLGAP3O95886 979 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MMEP08473 750 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 KRT7P08729 469 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 RNF224P0DH78 156 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MMP8P22894 467 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 F8A1P23610 371 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 SERPINA4P29622 427 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ADCY8P40145 1251 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 STAT5AP42229 794 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 GNPDA1P46926 289 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 FASLGP48023 281 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CSNK1DP48730 415 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 GPLD1P80108 840 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CDK3Q00526 305 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CTBSQ01459 385 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MC2RQ01718 297 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MC1RQ01726 317 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ABHD18Q0P651 414 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 RAPGEF1Q13905 1077 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 SEPT6Q14141 434 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ACOX1Q15067 660 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CAPRIN2Q6IMN6 1127 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TMEM71Q6P5X7 295 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 LYPD8Q6UX82 237 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ARHGAP22Q7Z5H3 698 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 PHLDB2Q86SQ0 1253 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF761Q86XN6 746 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CREBRFQ8IUR6 639 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 NRSN1Q8IZ57 195 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 UMODL1-AS1Q8N2C9 162 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TSEN2Q8NCE0 465 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC20A1Q8WUM9 679 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 COQ10AQ96MF6 247 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 NSMCE3Q96MG7 304 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CTRCQ99895 268 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 DPYSL5Q9BPU6 564 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 EFHD1Q9BUP0 239 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 NAA15Q9BXJ9 866 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 LRRC19Q9H756 370 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 PHPT1Q9NRX4 125 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CUEDC1Q9NWM3 386 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 RWDD2AQ9UIY3 292 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 NOCTQ9UK39 431 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 SUFUQ9UMX1 484 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 TMEM184BQ9Y519 407 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 KCTD3Q9Y597 815 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 FHOD1Q9Y613 1164 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MRPS18BQ9Y676 258 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 KCNMB2Q9Y691 235 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 ITPR3Q14573 2671 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 CACNA1DQ01668 2161 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 MTORP42345 2549 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 A8MX80 341 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 F8VZ95 297 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 MKRN2OSH3BPM6 223 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 FGF10O15520 208 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CREB3O43889 395 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 AGFG2O95081 481 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 DDAH2O95865 285 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CYP1A1P04798 512 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 IVLP07476 585 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 FURINP09958 794 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 UCHL3P15374 230 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 TCN2P20062 427 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 MAN1A1P33908 653 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 RFC1P35251 1148 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ACTR1BP42025 376 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 MTIF2P46199 727 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 POLD2P49005 469 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 GSCP56915 257 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ACTR1AP61163 376 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 FMO1Q01740 532 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 BCL2L1Q07817 233 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 PTP4A2Q12974 167 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 BIRC2Q13490 618 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 PEX6Q13608 980 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CNGA3Q16281 694 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 MAN2A1Q16706 1144 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 MIIPQ5JXC2 388 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 FHL5Q5TD97 284 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 KLHDC7AQ5VTJ3 777 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 TCTN3Q6NUS6 607 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 C16orf46Q6P387 395 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 WDR74Q6RFH5 385 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CEACAM20Q6UY09 585 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SLFN11Q7Z7L1 901 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 SRLQ86TD4 932 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF677Q86XU0 584 aa5.11□□□□□ -1.59
SNRNP40-204ENST00000474025 CCDC13Q8IYE1 715 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms