RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SIT1Q9Y3P8 196 aa10.1□□□□□ -0.79
APTX-216ENST00000472896 PCDHGA7Q9Y5G6 932 aa10.1□□□□□ -0.79
APTX-216ENST00000472896 RAD54BQ9Y620 910 aa10.1□□□□□ -0.79
APTX-216ENST00000472896 SPTBN2O15020 2390 aa10.1□□□□□ -0.79
APTX-216ENST00000472896 SAC3D1A6NKF1 404 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 AQP12BA6NM10 295 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 H0YCG3 227 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 PHGDHO43175 533 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 EXTL3O43909 919 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 KRT6AP02538 564 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 KRT6BP04259 564 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 KRT3P12035 628 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 FCGR1AP12314 374 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 FGFR3P22607 806 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 IL1R2P27930 398 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 SERPINB1P30740 379 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 IDUAP35475 653 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 MSX2P35548 267 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 OPRL1P41146 370 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 AASDHQ4L235 1098 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 FAM209AQ5JX71 171 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 GRTP1Q5TC63 336 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 BROXQ5VW32 411 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 SLC9A4Q6AI14 798 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 PLEKHG7Q6ZR37 379 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 TAS1R1Q7RTX1 841 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 AQP12AQ8IXF9 295 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 SFRP1Q8N474 314 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DHRSXQ8N5I4 330 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 OR2T34Q8NGX1 318 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 OR2T3Q8NH03 318 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 SLC7A14Q8TBB6 771 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 ZSCAN18Q8TBC5 510 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 USP33Q8TEY7 942 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RASSF5Q8WWW0 418 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 TMA16Q96EY4 203 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 SLC45A3Q96JT2 553 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 FOXQ1Q9C009 403 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 CEP44Q9C0F1 390 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 IL22Q9GZX6 179 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 NAA50Q9GZZ1 169 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 ANKEF1Q9NU02 776 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 CCM2LQ9NUG4 571 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 CD300AQ9UGN4 299 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RBMX2Q9Y388 322 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 ANGPTL3Q9Y5C1 460 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 FRYLO94915 3013 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 MYH9P35579 1960 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 ISPDA4D126 451 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 H0YAE9 185 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DLGAP1O14490 977 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 KCNN4O15554 427 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DDHD2O94830 711 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RASAL1O95294 804 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 TRUB2O95900 331 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 TOP3BO95985 862 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 SRFP11831 508 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 MATN1P21941 496 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 IL10P22301 178 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 TYK2P29597 1187 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RCVRNP35243 200 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RFC1P35251 1148 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 QARSP47897 775 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 AFF1P51825 1210 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 TPTEP56180 551 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 IFITM2Q01629 132 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 INPP5AQ14642 412 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 NOMO2Q5JPE7 1267 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 FAM45BPQ6NSW5 357 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DHFR2Q86XF0 187 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 CDKL3Q8IVW4 592 aaPredicted RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 FAM45AQ8TCE6 357 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 BTN2A3PQ96KV6 586 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 RPP25Q9BUL9 199 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 HERC2P3Q9BVR0 1158 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 WDR6Q9NNW5 1121 aaKnown RBP10.09□□□□□ -0.79
APTX-216ENST00000472896 SPAG4Q9NPE6 437 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 KMT5AQ9NQR1 393 aa10.09□□□□□ -0.79
APTX-216ENST00000472896 DOCK8Q8NF50 2099 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 G3V2L1 256 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 STX16-NPEPL1H3BU86 382 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ACOX3O15254 700 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 GRID2O43424 1007 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 RFPL2O75678 378 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 APRTP07741 180 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 CKMT2P17540 419 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 ENDOUP21128 410 aaKnown RBP10.08□□□□□ -0.8
APTX-216ENST00000472896 GSTM2P28161 218 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 GP5P40197 560 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 SERPINB10P48595 397 aa10.08□□□□□ -0.8
APTX-216ENST00000472896 CHRNEQ04844 493 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms