RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NFS1Q9Y697 457 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 XRN1Q8IZH2 1706 aaKnown RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 LRRIQ1Q96JM4 1722 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TRPM2O94759 1503 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 GLI3P10071 1580 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ABCC5O15440 1437 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CASKIN1Q8WXD9 1431 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 SHANK3Q9BYB0 1731 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CYP2D7A0A087X1C5 515 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 GPR75-ASB3A0A0A6YYF3 556 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 KDM4EB2RXH2 506 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 KLRF2D3W0D1 207 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TRIM77I1YAP6 450 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 VWA5AO00534 786 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 SLC22A2O15244 555 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ZBTB43O43298 467 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 KLK8O60259 260 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 HBP1O60381 514 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 FOXD2O60548 495 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 SELENOFO60613 162 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 PDGFBP01127 241 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 G6PDP11413 515 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 DRD4P21917 467 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 EEF1DP29692 281 aaKnown RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 SLC8A1P32418 973 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TCF7P36402 384 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 CAPZA1P52907 286 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 PMP22Q01453 160 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ACSM1Q08AH1 577 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 KIAA2012Q0VF49 1180 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 DRAP1Q14919 205 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 SF3B3Q15393 1217 aaKnown RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 PROSER3Q2NL68 480 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TBRG1Q3YBR2 411 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CRY2Q49AN0 593 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKRD20A4Q4UJ75 823 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKRD20A8PQ5CZ79 823 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKRD20A2Q5SQ80 823 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 LDLRAP1Q5SW96 308 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKRD20A1Q5TYW2 823 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKRD20A3Q5VUR7 823 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ISM2Q6H9L7 571 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TCTN3Q6NUS6 607 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 WDR93Q6P2C0 686 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ARMCX2Q7L311 632 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 PRSS45Q7RTY3 260 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CENPVQ7Z7K6 275 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 NEK8Q86SG6 692 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 LCA5Q86VQ0 697 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TMPRSS6Q8IU80 811 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 APCDD1Q8J025 514 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 FUKQ8N0W3 1084 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TRIML1Q8N9V2 468 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 WDR20Q8TBZ3 569 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 NEU4Q8WWR8 484 aaPredicted RBP2.7□□□□□ -1.98
XRN1-210ENST00000472697 CNDP1Q96KN2 507 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 EGLN2Q96KS0 407 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TEPSINQ96N21 525 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 SIN3AQ96ST3 1273 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 MAP7D2Q96T17 732 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ALOXE3Q9BYJ1 711 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TXNRD2Q9NNW7 524 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 DNAJC11Q9NVH1 559 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 HPF1Q9NWY4 346 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 MTMR10Q9NXD2 777 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 PPP1R14DQ9NXH3 145 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ANKFY1Q9P2R3 1169 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CHRNA9Q9UGM1 479 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 CDH22Q9UJ99 828 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 LAMP5Q9UJQ1 280 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 ADGRA2Q96PE1 1338 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 TMEM2Q9UHN6 1383 aa2.7□□□□□ -1.98
XRN1-210ENST00000472697 A0A1W2PPC1 479 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SYCE3A1L190 88 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZNF263O14978 683 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZBTB14O43829 449 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SPDEFO95238 335 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 CXCL14O95715 111 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SERPINC1P01008 464 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 HEXAP06865 529 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 NHLRC4P0CG21 123 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 UROSP10746 265 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 ERCC2P18074 760 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 IL4RP24394 825 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 LUMP51884 338 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 RPS7P62081 194 aaKnown RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 CCDC15Q0P6D6 951 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 EDRF1Q3B7T1 1238 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 TAF1BQ53T94 588 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 ZMAT1Q5H9K5 638 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 CST9LP1Q5W188 147 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 MCTP1Q6DN14 999 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SEPT14Q6ZU15 432 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 L3MBTL4Q8NA19 623 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 TP53I13Q8NBR0 393 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 OR8K5Q8NH50 307 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SETD6Q8TBK2 473 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 GRAPLQ8TC17 118 aaPredicted RBP2.69□□□□□ -1.98
XRN1-210ENST00000472697 HEXDCQ8WVB3 486 aa2.69□□□□□ -1.98
XRN1-210ENST00000472697 SLC25A28Q96A46 364 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms