RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 C2CD6Q53TS8 623 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CXorf57Q6NSI4 855 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 KIAA1161Q6NSJ0 714 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 RWDD4Q6NW29 188 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 PPP1R2P3Q6NXS1 205 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 DCUN1D2Q6PH85 259 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 MACC1Q6ZN28 852 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 TFAP2DQ7Z6R9 452 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PHLDB2Q86SQ0 1253 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 VPS36Q86VN1 386 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 FAM131BQ86XD5 332 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CCAR2Q8N163 923 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 AGBL5Q8NDL9 886 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ZNF397Q8NF99 534 aaPredicted RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 OR6C4Q8NGE1 309 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CCL4L1Q8NHW4 92 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SLC30A5Q8TAD4 765 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SCG3Q8WXD2 468 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 SLC39A13Q96H72 371 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CCDC114Q96M63 670 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CFAP57Q96MR6 1250 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ERGIC2Q96RQ1 377 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 TBCBQ99426 244 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 TMEM121Q9BTD3 319 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 NAA15Q9BXJ9 866 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 PLA2G12AQ9BZM1 189 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 TKTL2Q9H0I9 626 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PIGVQ9NUD9 493 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ADAM22Q9P0K1 906 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 NOCTQ9UK39 431 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 SIK3Q9Y2K2 1263 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 TMEM184BQ9Y519 407 aaPredicted RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PCDHGA9Q9Y5G4 932 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 SONP18583 2426 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 CNTRLQ7Z7A1 2325 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 LRRC53A6NM62 1247 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TMCO5BA8MYB1 307 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 B4E171 279 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 NUDT21O43809 227 aaKnown RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 SRGAP2O75044 1071 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 KATNA1O75449 491 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 CLDN11O75508 207 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 LEFTY1O75610 366 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 ENDOD1O94919 500 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 IGLV3-25P01717 112 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 STSP08842 583 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 ALPIP09923 528 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 THRAP10827 490 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 KRT3P12035 628 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 SRCP12931 536 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 CTSEP14091 401 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TNFAIP3P21580 790 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 GPD1P21695 349 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 MMP8P22894 467 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 FLT3P36888 993 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 DLSTP36957 453 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TSPAN7P41732 249 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 IRAK1P51617 712 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 CCL11P51671 97 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 NEK3P51956 506 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 CDH4P55283 916 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 FMO1Q01740 532 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 KLHL30Q0D2K2 578 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 SLC12A1Q13621 1099 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 CLEC16AQ2KHT3 1053 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 ACBD5Q5T8D3 534 aaPredicted RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 HMBOX1Q6NT76 420 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 FBXL22Q6P050 247 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 LUZP1Q86V48 1076 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 GKN2Q86XP6 184 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 WDTC1Q8N5D0 677 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 SH2D3CQ8N5H7 860 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 EMC1Q8N766 993 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 FAM46DQ8NEK8 389 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TMIEQ8NEW7 156 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 PDXPQ96GD0 296 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 CCDC120Q96HB5 630 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 MCEEQ96PE7 176 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 RUFY1Q96T51 708 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 AGPAT1Q99943 283 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 C2orf49Q9BVC5 232 aaPredicted RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 TWSG1Q9GZX9 223 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TNKS2Q9H2K2 1166 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 DYRK4Q9NR20 520 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 TNFRSF10DQ9UBN6 386 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 ZNF451Q9Y4E5 1061 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 FARP1Q9Y4F1 1045 aaPredicted RBP5.86□□□□□ -1.47
VARS-222ENST00000470953 PCDHB3Q9Y5E6 796 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 OR51B4Q9Y5P0 310 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 HS3ST4Q9Y661 456 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 WASF2Q9Y6W5 498 aa5.86□□□□□ -1.47
VARS-222ENST00000470953 PIPSLA2A3N6 862 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 A8MU76 341 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CLGNO14967 610 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 FANCGO15287 622 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CBFA2T2O43439 604 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms