RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PAPOLAP51003 745 aaKnown RBP18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 TPI1P60174 286 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 CNGA3Q16281 694 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 C6orf15Q6UXA7 325 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 TWSG1Q9GZX9 223 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 SP110Q9HB58 689 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 CROTQ9UKG9 612 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 SLC17A4Q9Y2C5 497 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 CRYBG3Q68DQ2 2970 aa18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 TNRC6AQ8NDV7 1962 aaKnown RBP18.88■□□□□ 0.61
NCKIPSD-209ENST00000470006 PIPSLA2A3N6 862 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 DLGAP3O95886 979 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 COL8A1P27658 744 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 VIPR1P32241 457 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 RFC1P35251 1148 aaPredicted RBP18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 GPR1P46091 355 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 FASLGP48023 281 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 NDST2P52849 883 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 HHEXQ03014 270 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 MAN2A1Q16706 1144 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 STAMBPL1Q96FJ0 436 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 SLC39A8Q9C0K1 460 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 LRRC19Q9H756 370 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 CUEDC1Q9NWM3 386 aaPredicted RBP18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 OAS3Q9Y6K5 1087 aaKnown RBP18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 CELSR2Q9HCU4 2923 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 LRBAP50851 2863 aa18.87■□□□□ 0.61
NCKIPSD-209ENST00000470006 DFFAO00273 331 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 HEXIM1O94992 359 aaKnown RBP18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 FURINP09958 794 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 RNF224P0DH78 156 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 CYP2A6P11509 494 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 NFKBIAP25963 317 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 MAP7Q14244 749 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 KLHDC7AQ5VTJ3 777 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 WDR59Q6PJI9 974 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 HSD11B1LQ7Z5J1 315 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 TMEM135Q86UB9 458 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 GALNT13Q8IUC8 556 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 GALNT6Q8NCL4 622 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 EPS8L1Q8TE68 723 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 FNIP1Q8TF40 1166 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 DTD2Q96FN9 168 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 NDST4Q9H3R1 872 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 MAP10Q9P2G4 905 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 FZD10Q9ULW2 581 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 SRPK3Q9UPE1 567 aa18.86■□□□□ 0.61
NCKIPSD-209ENST00000470006 TTC24A2A3L6 582 aaPredicted RBP18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 ANKRD62A6NC57 917 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 TRAFD1O14545 582 aaPredicted RBP18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 DAPK3O43293 454 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 PMS2P54278 862 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 NSUN2Q08J23 767 aaKnown RBP eCLIP18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 VWA3BQ502W6 1294 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 Q6ZVL8 140 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 ZNF677Q86XU0 584 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 RASGRP3Q8IV61 690 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 SFRP1Q8N474 314 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 LZTR1Q8N653 840 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 SH3KBP1Q96B97 665 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 ZNHIT2Q9UHR6 403 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 CD84Q9UIB8 345 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 KCND3Q9UK17 655 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 PCDHGC4Q9Y5F7 938 aa18.85■□□□□ 0.61
NCKIPSD-209ENST00000470006 MED13Q9UHV7 2174 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CCP110O43303 1012 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 DNAJB5O75953 348 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 GFPT2O94808 682 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 ASMTLO95671 621 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 DDAH2O95865 285 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CPP00450 1065 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 PDGFAP04085 211 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CCNYL3P0C7X3 344 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CASP14P31944 242 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 RENBPP51606 427 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 AP1S1P61966 158 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CDR2Q01850 454 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 EIF2S3LQ2VIR3 472 aaKnown RBP18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 ELMO2Q96JJ3 720 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 STK33Q9BYT3 514 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 ADAM22Q9P0K1 906 aa18.84■□□□□ 0.61
NCKIPSD-209ENST00000470006 F8VZ95 297 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 SNX2O60749 519 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 EML2O95834 649 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 CYP1A1P04798 512 aaPredicted RBP18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 UCHL3P15374 230 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 ZNF28P17035 718 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 NSFP46459 744 aaKnown RBP18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 NADK2Q4G0N4 442 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 PYCR3Q53H96 274 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 DPY19L2P1Q6NXN4 242 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 MAMDC2Q7Z304 686 aaPredicted RBP18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 PLXDC1Q8IUK5 500 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 PRR7Q8TB68 274 aa18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 SARS2Q9NP81 518 aaKnown RBP18.83■□□□□ 0.6
NCKIPSD-209ENST00000470006 CNOT8Q9UFF9 292 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms