RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 H7C0C1 242 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 FTCDO95954 541 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 SLC4A1P02730 911 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 GP1BAP07359 652 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PYGMP11217 842 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 CTNNA2P26232 953 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 RBL1P28749 1068 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 ATP5OP48047 213 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 RWDD2BP57060 319 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 DPTQ07507 201 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PPP2R5EQ16537 467 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 LVRNQ6Q4G3 990 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 BBS12Q6ZW61 710 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PROSER1Q86XN7 944 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 ZNF567Q8N184 647 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 LRRC57Q8N9N7 239 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 HTR3CQ8WXA8 447 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 ALG3Q92685 438 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 TADA1Q96BN2 335 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 EID2BQ96D98 161 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 LYSMD1Q96S90 227 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 FRMD8Q9BZ67 464 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-205ENST00000468143 OSBPL8Q9BZF1 889 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 DPEP2Q9H4A9 486 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 FAM83DQ9H4H8 585 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 SYNDIG1Q9H7V2 258 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 NCKIPSDQ9NZQ3 722 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 KLHL8Q9P2G9 620 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-205ENST00000468143 SUFUQ9UMX1 484 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PLEKHM1Q9Y4G2 1056 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PCDHB1Q9Y5F3 818 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 ANKRD36A6QL64 1941 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 LRRK1Q38SD2 2015 aa11.5□□□□□ -0.57
CDHR3-205ENST00000468143 TDRD6O60522 2096 aaKnown RBP11.5□□□□□ -0.57
CDHR3-205ENST00000468143 PLXNB3Q9ULL4 1909 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 B4DGG1 531 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ASMTLO95671 621 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 AK4P27144 223 aaPredicted RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 SPINT3P49223 89 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 COPS2P61201 443 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 OTUD4Q01804 1114 aaKnown RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 NOMO1Q15155 1222 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CDCP2Q5VXM1 449 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ADAMTSL4Q6UY14 1074 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 PEX26Q7Z412 305 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 NRROSQ86YC3 692 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 NRSN1Q8IZ57 195 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 SLC25A41Q8N5S1 370 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 DCBLD1Q8N8Z6 715 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 Q8N9G6 341 aaPredicted RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ACTL9Q8TC94 416 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CCDC74AQ96AQ1 378 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 HIC2Q96JB3 615 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CALR3Q96L12 384 aaKnown RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 QKIQ96PU8 341 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 CCDC3Q9BQI4 270 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 ZFYVE1Q9HBF4 777 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 SPATS2LQ9NUQ6 558 aaKnown RBP11.49□□□□□ -0.57
CDHR3-205ENST00000468143 PKD2L2Q9NZM6 624 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 AMFRQ9UKV5 643 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 DNPEPQ9ULA0 475 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 RAXQ9Y2V3 346 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 PRKAB1Q9Y478 270 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
CDHR3-205ENST00000468143 FADS2P1A8MWK0 482 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 HACD1B0YJ81 288 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 APOC4-APOC2K7ER74 178 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 AURKAO14965 403 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 MTSS1O43312 755 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 NOBOXO60393 691 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 CSO75390 466 aaKnown RBP11.48□□□□□ -0.57
CDHR3-205ENST00000468143 NDST3O95803 873 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 APOC2P02655 101 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 TEAD1P28347 426 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 ADCY8P40145 1251 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 CHRNA4P43681 627 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 WNT3AP56704 352 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 EIF3EP60228 445 aaKnown RBP11.48□□□□□ -0.57
CDHR3-205ENST00000468143 CTBSQ01459 385 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 ZNF648Q5T619 568 aaPredicted RBP11.48□□□□□ -0.57
CDHR3-205ENST00000468143 DARS2Q6PI48 645 aaKnown RBP11.48□□□□□ -0.57
CDHR3-205ENST00000468143 OGFOD3Q6PK18 319 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 SLC30A9Q6PML9 568 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 KDELC1Q6UW63 502 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 ZNF765Q7L2R6 523 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 NLRP8Q86W28 1048 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 SDR16C5Q8N3Y7 309 aa11.48□□□□□ -0.57
CDHR3-205ENST00000468143 GPR26Q8NDV2 337 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms