RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PWWP2AQ96N64 755 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 FMO2Q99518 471 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 KLF6Q99612 283 aaPredicted RBP15.16■□□□□ 0.02
SNIP1-202ENST00000468040 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
SNIP1-202ENST00000468040 ORAI3Q9BRQ5 295 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 ABCG8Q9H221 673 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 EIF2B4Q9UI10 523 aaKnown RBP15.16■□□□□ 0.02
SNIP1-202ENST00000468040 CD84Q9UIB8 345 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 APPL1Q9UKG1 709 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 RAB23Q9ULC3 237 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 KCTD3Q9Y597 815 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 LRRK1Q38SD2 2015 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 FANCMQ8IYD8 2048 aa15.16■□□□□ 0.02
SNIP1-202ENST00000468040 MYLKQ15746 1914 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 GLYATL1P3A0A0U1RQE8 302 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 H7C0S8 307 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 RAD51BO15315 384 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TTC4O95801 387 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TSHRP16473 764 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 PGAM1P18669 254 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 PAMP19021 973 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TEAD1P28347 426 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 ACVR1Q04771 509 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 PTPRCAPQ14761 206 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 STAT4Q14765 748 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 IRF4Q15306 451 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 HENMT1Q5T8I9 393 aaKnown RBP15.15■□□□□ 0.02
SNIP1-202ENST00000468040 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 PDPK2PQ6A1A2 396 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TMEM135Q86UB9 458 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 AGGF1Q8N302 714 aaeCLIP15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TRAM1L1Q8N609 369 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TMEM145Q8NBT3 493 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 FAM174AQ8TBP5 190 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 LOXL4Q96JB6 756 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 MYOCQ99972 504 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 ZSCAN5AQ9BUG6 496 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 RIOK2Q9BVS4 552 aaKnown RBP15.15■□□□□ 0.02
SNIP1-202ENST00000468040 MIR1-1HGQ9H1L0 117 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 ANKZF1Q9H8Y5 726 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 EBF2Q9HAK2 575 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 FZD3Q9NPG1 666 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 IL26Q9NPH9 171 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TREX1Q9NSU2 369 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 HCN4Q9Y3Q4 1203 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 TEX264Q9Y6I9 313 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 CEP192Q8TEP8 1941 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 THADAQ6YHU6 1953 aa15.15■□□□□ 0.02
SNIP1-202ENST00000468040 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 TOR1BO14657 336 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 USP1O94782 785 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PRAMEF1O95521 474 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PCCBP05166 539 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 POLBP06746 335 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 GNSP15586 552 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 MCM3P25205 808 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 MAOBP27338 520 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 TNFRSF8P28908 595 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ECHS1P30084 290 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 HOXD12P35452 270 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ELK3P41970 407 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 GPR1P46091 355 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 RACK1P63244 317 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PRAMEP78395 509 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 TMPRSS15P98073 1019 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ITGA9Q13797 1035 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 RAET1GQ6H3X3 334 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PNCKQ6P2M8 343 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 FAM151BQ6UXP7 276 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 KYAT3Q6YP21 454 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ZBED8Q8IZ13 594 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 OR13J1Q8NGT2 312 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PYROXD1Q8WU10 500 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ATOH1Q92858 354 aaPredicted RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 MFSD3Q96ES6 412 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 CDKN2AIPNLQ96HQ2 116 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 SPATA16Q9BXB7 569 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 SEMA4AQ9H3S1 761 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 SAYSD1Q9NPB0 183 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 MBNL1Q9NR56 388 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 AASDHPPTQ9NRN7 309 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ZC3H7BQ9UGR2 993 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 SUSD2Q9UGT4 822 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 FKBPLQ9UIM3 349 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 NFU1Q9UMS0 254 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 CHMP2BQ9UQN3 213 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 FNDC3AQ9Y2H6 1198 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 RPS6KL1Q9Y6S9 549 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 PLXNA2O75051 1894 aa15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ZNF106Q9H2Y7 1883 aaKnown RBP15.14■□□□□ 0.01
SNIP1-202ENST00000468040 ABCA7Q8IZY2 2146 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 A6NNZ2 444 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 PRR5-ARHGAP8B1AHC4 643 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms