RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ZBTB1Q9Y2K1 713 aa5.75□□□□□ -1.49
LRCH3-212ENST00000466845 FPGT-TNNI3KV9GXZ4 949 aa5.75□□□□□ -1.49
LRCH3-212ENST00000466845 SHPRHQ149N8 1683 aa5.75□□□□□ -1.49
LRCH3-212ENST00000466845 SPATA31A6Q5VVP1 1343 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MST1RQ04912 1400 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SETD1AO15047 1707 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 A0A1W2PR48 441 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 WDR91A4D1P6 747 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 KIAA0355O15063 1070 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 VILLO15195 856 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 NUDT21O43809 227 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CDC123O75794 336 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 DIRAS3O95661 229 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 GASTP01350 101 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ALPPP05187 535 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CALM1P0DP23 149 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CALM2P0DP24 149 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CALM3P0DP25 149 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ALPPL2P10696 532 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SERPINB8P50452 374 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CCT4P50991 539 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 AGFG1P52594 562 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ATP12AP54707 1039 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 UBE2HP62256 183 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 DUSP2Q05923 314 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 PPATQ06203 517 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 LMAN2Q12907 356 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MRPL49Q13405 166 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CUL3Q13618 768 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 TOB2Q14106 344 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 RCN2Q14257 317 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ALX1Q15699 326 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CHRNA6Q15825 494 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SGCAQ16586 387 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MCMDC2Q4G0Z9 681 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SLC9B1Q4ZJI4 515 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CLVS2Q5SYC1 327 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 GKAP1Q5VSY0 366 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SIGIRRQ6IA17 410 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 FOXR2Q6PJQ5 311 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SLC36A4Q6YBV0 504 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 Q6ZRM9 215 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 DOK3Q7L591 496 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 TMCO2Q7Z6W1 182 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 PXKQ7Z7A4 578 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SYCP3Q8IZU3 236 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SYCE1Q8N0S2 351 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 TAGAPQ8N103 731 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ARFGAP2Q8N6H7 521 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CCNYL1Q8N7R7 359 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 TDRD5Q8NAT2 981 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ATAD1Q8NBU5 361 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 OR5M3Q8NGP4 307 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 GPR150Q8NGU9 434 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 KLHDC4Q8TBB5 520 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SCFD1Q8WVM8 642 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 UBLCP1Q8WVY7 318 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 JADE3Q92613 823 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 DPF2Q92785 391 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 LENG9Q96B70 501 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 PTERQ96BW5 349 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ZNF653Q96CK0 615 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 C1GALT1C1Q96EU7 318 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MVB12AQ96EY5 273 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ALG14Q96F25 216 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SIPA1Q96FS4 1042 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 HMCESQ96FZ2 354 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MED30Q96HR3 178 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ABHD8Q96I13 439 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 FAM71F1Q96KD3 344 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 TSNARE1Q96NA8 513 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 OR1F2PQ96R84 312 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ST6GALNAC4Q9H4F1 302 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ATP13A3Q9H7F0 1226 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 PARVBQ9HBI1 364 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 FBRSL1Q9HCM7 1045 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MRPL40Q9NQ50 206 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 RAB20Q9NX57 234 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 ING3Q9NXR8 418 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SMPD3Q9NY59 655 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 MIS18AQ9NYP9 233 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 STX18Q9P2W9 335 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CRNNQ9UBG3 495 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SEC63Q9UGP8 760 aaKnown RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 CHMP2BQ9UQN3 213 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 USP16Q9Y5T5 823 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SNX13Q9Y5W8 968 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 GPR45Q9Y5Y3 372 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 INSRP06213 1382 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 RPAP1Q9BWH6 1393 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-212ENST00000466845 RAB3GAP2Q9H2M9 1393 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 IFT172Q9UG01 1749 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 LAMC1P11047 1609 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 FAM205AQ6ZU69 1335 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 SH3TC1Q8TE82 1336 aa5.74□□□□□ -1.49
LRCH3-212ENST00000466845 DENND3A2RUS2 1198 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PCDH17O14917 1159 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms