RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 HEY2Q9UBP5 337 aa10.05□□□□□ -0.8
PMF1-204ENST00000466489 IL36AQ9UHA7 158 aa10.05□□□□□ -0.8
PMF1-204ENST00000466489 CHKBQ9Y259 395 aa10.05□□□□□ -0.8
PMF1-204ENST00000466489 FCF1Q9Y324 198 aaKnown RBP10.05□□□□□ -0.8
PMF1-204ENST00000466489 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
PMF1-204ENST00000466489 ANKRD36A6QL64 1941 aa10.05□□□□□ -0.8
PMF1-204ENST00000466489 MUC6Q6W4X9 2439 aa10.05□□□□□ -0.8
PMF1-204ENST00000466489 CEP192Q8TEP8 1941 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 DYTNA2CJ06 578 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 MAGEA13PA6NCF6 341 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 NVLO15381 856 aaKnown RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 NDUFS2O75306 463 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 GLRA3O75311 464 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 POP4O95707 220 aaKnown RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 MT-CO1P00395 513 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 SERPINA6P08185 405 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TPBGLP0DKB5 382 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 GNAZP19086 355 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 CCNCP24863 283 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 NFKBIAP25963 317 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PRDX6P30041 224 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PSMD8P48556 350 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 GBE1Q04446 702 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 AP1B1Q10567 949 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 KCNJ11Q14654 390 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 CST6Q15828 149 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 RALGPS1Q5JS13 557 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 C9orf64Q5T6V5 341 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 MARC1Q5VT66 337 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 USP30Q70CQ3 517 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 CACUL1Q86Y37 369 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 MMAAQ8IVH4 418 aaKnown RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 STK40Q8N2I9 435 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PQLC3Q8N755 202 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PLD5Q8N7P1 536 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 CATSPER1Q8NEC5 780 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 GAB3Q8WWW8 586 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 PTPRN2Q92932 1015 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 ERLEC1Q96DZ1 483 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 OXNAD1Q96HP4 312 aaPredicted RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TSGA13Q96PP4 275 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TRAPPC9Q96Q05 1148 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 VAT1Q99536 393 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 EBNA1BP2Q99848 306 aaKnown RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 HEPHQ9BQS7 1158 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TM6SF2Q9BZW4 377 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 Q9H521 79 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 ZDHHC6Q9H6R6 413 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 SUDS3Q9H7L9 328 aaPredicted RBP10.04□□□□□ -0.8
PMF1-204ENST00000466489 NPHS2Q9NP85 383 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 C2orf42Q9NWW7 574 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 DTLQ9NZJ0 730 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 ZFATQ9P243 1243 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 TAGLN3Q9UI15 199 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 HAO1Q9UJM8 370 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 THADAQ6YHU6 1953 aa10.04□□□□□ -0.8
PMF1-204ENST00000466489 A0A0G2JND7 137 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 ANTXRLA6NF34 631 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 J3KR12 359 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 K7ERQ8 282 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 KPNA3O00505 521 aaPredicted RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 GSC2O15499 205 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SMAD6O43541 496 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 MAFKO60675 156 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SPAG7O75391 227 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 POLBP06746 335 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 RPSAP08865 295 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 TDGF1P13385 188 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 CES1P23141 567 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 GCAP28676 217 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SERPINA4P29622 427 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 PGM1P36871 562 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 ETV4P43268 484 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 CCNHP51946 323 aaPredicted RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 NEK3P51956 506 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 COPAP53621 1224 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 GPX6P59796 221 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 AP1S1P61966 158 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 RPS14P62263 151 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 PPIDQ08752 370 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
PMF1-204ENST00000466489 STX3Q13277 289 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 HNRNPDQ14103 355 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 SIM2Q14190 667 aaPredicted RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 DPY19L3Q6ZPD9 716 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 PRR23BQ6ZRT6 265 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SDCCAG8Q86SQ7 713 aaPredicted RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 C4orf33Q8N1A6 199 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 ZBTB44Q8NCP5 570 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms