RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 NAA25Q14CX7 972 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 EIF4HQ15056 248 aaKnown RBP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 TBCCQ15814 346 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 CCNJLQ8IV13 435 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 PAF1Q8N7H5 531 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 MIEF2Q96C03 454 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 AGAP2Q99490 1192 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SIKE1Q9BRV8 207 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ADGRE3Q9BY15 652 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 TMEM245Q9H330 911 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ARL8BQ9NVJ2 186 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SARDHQ9UL12 918 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 DENND4AQ7Z401 1863 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ALDH1A2O94788 518 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 MYL2P10916 166 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SERPINA4P29622 427 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 GCKP35557 465 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 RECQLP46063 649 aaPredicted RBP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ARSDP51689 593 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 EPHB1P54762 984 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 PON2Q15165 354 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 HSP90AA5PQ58FG0 334 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 RALGPS1Q5JS13 557 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SERPINA13PQ6UXR4 307 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 OR13C4Q8NGS5 318 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 OR13J1Q8NGT2 312 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 ACMSDQ8TDX5 336 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 KLHL32Q96NJ5 620 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 MIPEPQ99797 713 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 NAT9Q9BTE0 207 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 CADM1Q9BY67 442 aaKnown RBP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 WWP1Q9H0M0 922 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 SUV39H2Q9H5I1 410 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 DENND2DQ9H6A0 471 aaPredicted RBP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.61■□□□□ 0.57
CAPN3-209ENST00000466222 PSAT1Q9Y617 370 aa18.61■□□□□ 0.57
CAPN3-209ENST00000466222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 MROH6A6NGR9 719 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 GYG2O15488 501 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 GSC2O15499 205 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 TIMM44O43615 452 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 SIN3BO75182 1162 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 VAPBO95292 243 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 APODP05090 189 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 ESRRAP11474 423 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 TAF11Q15544 211 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 SPANXN3Q5MJ09 141 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 C9orf64Q5T6V5 341 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 STK40Q8N2I9 435 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 BRSK1Q8TDC3 778 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 EID2BQ96D98 161 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 CERS2Q96G23 380 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 HEPHQ9BQS7 1158 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 SUDS3Q9H7L9 328 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 TREX1Q9NSU2 369 aa18.6■□□□□ 0.57
CAPN3-209ENST00000466222 C20orf96Q9NUD7 363 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 NKX1-2Q9UD57 310 aaPredicted RBP18.6■□□□□ 0.57
CAPN3-209ENST00000466222 HEATR9A2RTY3 570 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 SHISA7A6NL88 538 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 GOLGA8CPA6NN73 597 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 FCHO1O14526 889 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 EGFP01133 1207 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 TIE1P35590 1138 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 MAPK8P45983 427 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 HNRNPA1L2Q32P51 320 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 TSTD2Q5T7W7 516 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 GDPD4Q6W3E5 623 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 KYAT3Q6YP21 454 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 NAF1Q96HR8 494 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 DNAJC1Q96KC8 554 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 CPEB1Q9BZB8 566 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 THAP10Q9P2Z0 257 aaPredicted RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 STOML1Q9UBI4 398 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 SLC8A2Q9UPR5 921 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 OR51F1A6NGY5 319 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 SOCS5O75159 536 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 GM2AP17900 193 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 HNF1BP35680 557 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 ARCN1P48444 511 aaKnown RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 VASPP50552 380 aaPredicted RBP18.59■□□□□ 0.57
CAPN3-209ENST00000466222 OCRLQ01968 901 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 TSNAXIP1Q2TAA8 658 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 C2orf27AQ580R0 203 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 CDHR3Q6ZTQ4 885 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 GLT6D1Q7Z4J2 308 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 NUDCD3Q8IVD9 361 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 MCUR1Q96AQ8 359 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 ECHDC3Q96DC8 303 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 BPIFA1Q9NP55 256 aa18.59■□□□□ 0.57
CAPN3-209ENST00000466222 EPHX1P07099 455 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 KIR2DL1P43626 348 aaPredicted RBP18.58■□□□□ 0.56
CAPN3-209ENST00000466222 BST1Q10588 318 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 TSPAN33Q86UF1 283 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 CRLF3Q8IUI8 442 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 PLPP6Q8IY26 295 aa18.58■□□□□ 0.56
CAPN3-209ENST00000466222 CHPFQ8IZ52 775 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms