RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RBM38Q9H0Z9 239 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 IL25Q9H293 177 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 PPP1R3EQ9H7J1 279 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 PCDH9Q9HC56 1237 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 GPR108Q9NPR9 543 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SETD4Q9NVD3 440 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 HAUS2Q9NVX0 235 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 HIF1ANQ9NWT6 349 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 TRMT1Q9NXH9 659 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CLIC5Q9NZA1 410 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 RNF7Q9UBF6 113 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SEC63Q9UGP8 760 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 TINAGQ9UJW2 476 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF215Q9UL58 517 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 FZD10Q9ULW2 581 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CDC14AQ9UNH5 594 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 EXO1Q9UQ84 846 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM184BQ9Y519 407 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CLIC4Q9Y696 253 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SESN1Q9Y6P5 492 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MAU2Q9Y6X3 613 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ATXN2Q99700 1313 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF541Q9H0D2 1346 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF644Q9H582 1327 aaPredicted RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 A0A1W2PQ09 198 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 C1orf226A1L170 272 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 OR2A25A4D2G3 310 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 H3BNX3 289 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 VCYO14598 125 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 AP3D1O14617 1153 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SMAD9O15198 467 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 PLRG1O43660 514 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ENTPD3O75355 529 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TSPAN9O75954 239 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CSPG5O95196 566 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CH25HO95992 272 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 HIST1H2ABP04908 130 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 IGKV2-30P06310 120 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TUBBP07437 444 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 IGHV4-30-4P0DP06 118 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ACTN1P12814 892 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SRCP12931 536 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 KRT10P13645 584 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM11P17152 192 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 HIST1H2ADP20671 130 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 IL11P20809 199 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 UGT1A1P22309 533 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 UBA1P22314 1058 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 PON1P27169 355 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 EIF2S3P41091 472 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 APOBEC1P41238 236 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 RAD52P43351 418 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CAMPP49913 170 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 MMP14P50281 582 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 FOXG1P55316 489 aaPredicted RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 HNRNPH2P55795 449 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SEC61BP60468 96 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 IFI35P80217 286 aaPredicted RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 MRPS5P82675 430 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TFAP4Q01664 338 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 EGR4Q05215 589 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TRAF2Q12933 501 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 KCTD2Q14681 263 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 WTAPQ15007 396 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 OASLQ15646 514 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 EFHC1Q5JVL4 640 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 DAB2IPQ5VWQ8 1189 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 FRG2Q64ET8 278 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 BRAT1Q6PJG6 821 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 HIST3H2AQ7L7L0 130 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TAOK1Q7L7X3 1001 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ATG9AQ7Z3C6 839 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CACNA2D4Q7Z3S7 1137 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 GALNT5Q7Z7M9 940 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ADGRA1Q86SQ6 560 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ZC3HC1Q86WB0 502 aaKnown RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 PALB2Q86YC2 1186 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CCDC13Q8IYE1 715 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 LSMEM1Q8N8F7 131 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 MIGA1Q8NAN2 632 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF114Q8NC26 417 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 RND1Q92730 232 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ZKSCAN4Q969J2 545 aaPredicted RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 TAAR8Q969N4 342 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 MIB2Q96AX9 1013 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 GRAMD2BQ96HH9 432 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 FEM1CQ96JP0 617 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 HARBI1Q96MB7 349 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CEP295NLQ96MC4 621 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 NEUROD6Q96NK8 337 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 DACH2Q96NX9 599 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 FIZ1Q96SL8 496 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 C1QTNF1Q9BXJ1 281 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 NDST4Q9H3R1 872 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 SH2D4AQ9H788 454 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 C17orf75Q9HAS0 396 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 CNGB3Q9NQW8 809 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 RRP7BPQ9NSQ0 103 aa1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 ACSS1Q9NUB1 689 aaPredicted RBP1.92□□□□□ -2.1
NUCKS1-202ENST00000464938 PAG1Q9NWQ8 432 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms