RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 CLCA2Q9UQC9 943 aa16.22■□□□□ 0.19
SSNA1-204ENST00000464553 SLC17A4Q9Y2C5 497 aa16.22■□□□□ 0.19
SSNA1-204ENST00000464553 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
SSNA1-204ENST00000464553 LOC285095A0A1B0GVY8 99 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 GRID2IPA4D2P6 1211 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 KRT86O43790 486 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 TCEA3O75764 348 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 MT-CO3P00414 261 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 TARDBPQ13148 414 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSNA1-204ENST00000464553 RTP5Q14D33 572 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 PDPK2PQ6A1A2 396 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 PID1Q7Z2X4 250 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.19
SSNA1-204ENST00000464553 SLC35F3Q8IY50 421 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 PELI3Q8N2H9 469 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 IFI44Q8TCB0 444 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 DTX3LQ8TDB6 740 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 GSDMCQ9BYG8 508 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 CYP4F12Q9HCS2 524 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSNA1-204ENST00000464553 VPS18Q9P253 973 aa16.21■□□□□ 0.19
SSNA1-204ENST00000464553 LRRK1Q38SD2 2015 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 CPED1A4D0V7 1026 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 GOLGA6L9A6NEM1 432 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ARHGAP6O43182 974 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 STK10O94804 968 aaKnown RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 SOD1P00441 154 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 PNLIPP16233 465 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 CD68P34810 354 aaPredicted RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 DCDC1P59894 354 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ILF3Q12906 894 aaKnown RBP eCLIP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 MPP3Q13368 585 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 LRP8Q14114 963 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 PTPRRQ15256 657 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 HENMT1Q5T8I9 393 aaKnown RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ZDHHC20Q5W0Z9 365 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ITPRIPL1Q6GPH6 555 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 TMC3Q7Z5M5 1100 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 TAF8Q7Z7C8 310 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 CDKL3Q8IVW4 592 aaPredicted RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ZNF567Q8N184 647 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 GPR156Q8NFN8 814 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 MAPK15Q8TD08 544 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ZCCHC14Q8WYQ9 949 aaKnown RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 SCAMP4Q969E2 229 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 PDXPQ96GD0 296 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 COX14Q96I36 57 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 DEPDC7Q96QD5 511 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 RIOK2Q9BVS4 552 aaKnown RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 CEP41Q9BYV8 373 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 RMI1Q9H9A7 625 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 HACD3Q9P035 362 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 KLHL8Q9P2G9 620 aaPredicted RBP16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ZMIZ1Q9ULJ6 1067 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 ADGRG1Q9Y653 693 aa16.2■□□□□ 0.18
SSNA1-204ENST00000464553 MACROD2A1Z1Q3 448 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 GPR89AB7ZAQ6 455 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 H7C0C1 242 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ANXA9O76027 345 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 MT-CYBP00156 380 aaPredicted RBP16.19■□□□□ 0.18
SSNA1-204ENST00000464553 GPR89BP0CG08 455 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 PYGMP11217 842 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ATP5OP48047 213 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ZNF662Q6ZS27 426 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 EFL1Q7Z2Z2 1120 aaKnown RBP16.19■□□□□ 0.18
SSNA1-204ENST00000464553 FAM46DQ8NEK8 389 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 SPATA22Q8NHS9 363 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ACTL9Q8TC94 416 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ALG3Q92685 438 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 NXPE2Q96DL1 559 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 HES6Q96HZ4 224 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 ZSCAN5AQ9BUG6 496 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 CAAP1Q9H8G2 361 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 CARS2Q9HA77 564 aaKnown RBP16.19■□□□□ 0.18
SSNA1-204ENST00000464553 MRPL40Q9NQ50 206 aaKnown RBP16.19■□□□□ 0.18
SSNA1-204ENST00000464553 APPL1Q9UKG1 709 aa16.19■□□□□ 0.18
SSNA1-204ENST00000464553 PTPRBP23467 1997 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 FAM149AA5PLN7 773 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GOLGA6CA6NDK9 693 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GOLGA6BA6NDN3 693 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 ZW10O43264 779 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 NRDCO43847 1150 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 PPFIA2O75334 1257 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GOLGA6DP0CG33 693 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 RBP3P10745 1247 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GLB1P16278 677 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 HLA-DPA1P20036 260 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 HMGCLP35914 325 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GEMP55040 296 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 WNT3AP56704 352 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 OTUD4Q01804 1114 aaKnown RBP16.18■□□□□ 0.18
SSNA1-204ENST00000464553 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 GUSBP11Q6P575 273 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 KDELC1Q6UW63 502 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 LSMEM2Q8N112 164 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 PLEKHG4BQ96PX9 1271 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 SMIM14Q96QK8 99 aa16.18■□□□□ 0.18
SSNA1-204ENST00000464553 WDR24Q96S15 920 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms