RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 KCTD3Q9Y597 815 aa13.25□□□□□ -0.29
MRPL55-224ENST00000464148 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
MRPL55-224ENST00000464148 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 SIGLEC16A6NMB1 481 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 DAPK3O43293 454 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 VPS4BO75351 444 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 CALB1P05937 261 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 NFKBIAP25963 317 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 VIPR1P32241 457 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 HTR7P34969 479 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 RENBPP51606 427 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 PTP4A2Q12974 167 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 RFTN1Q14699 578 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 WDR74Q6RFH5 385 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 HSD11B1LQ7Z5J1 315 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 NCSTNQ92542 709 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 DTD2Q96FN9 168 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 OR2M4Q96R27 311 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 APMAPQ9HDC9 416 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 PRDM8Q9NQV8 689 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 VPS4AQ9UN37 437 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 TMEM184BQ9Y519 407 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 MRPS18BQ9Y676 258 aaKnown RBP13.24□□□□□ -0.29
MRPL55-224ENST00000464148 KCNMB2Q9Y691 235 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 NOTCH2Q04721 2471 aa13.24□□□□□ -0.29
MRPL55-224ENST00000464148 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 TTC24A2A3L6 582 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 EEF2KO00418 725 aaKnown RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 POLR1CO15160 346 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 MAP3K6O95382 1288 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 CPP00450 1065 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 CYP2A6P11509 494 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 STAT5AP42229 794 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 MAPK9P45984 424 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 GPR1P46091 355 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 FASLGP48023 281 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 NFATC2Q13469 925 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 CRTC2Q53ET0 693 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 Q6ZVL8 140 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 ASB18Q6ZVZ8 466 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 MARK2Q7KZI7 788 aaKnown RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 ARHGAP22Q7Z5H3 698 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 ESX1Q8N693 406 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 SLC37A2Q8TED4 501 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 VPS16Q9H269 839 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 DHX35Q9H5Z1 703 aaKnown RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 STN1Q9H668 368 aaKnown RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
MRPL55-224ENST00000464148 GPATCH2LQ9NWQ4 482 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 KLHL3Q9UH77 587 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 TMEM98Q9Y2Y6 226 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 RPS6KL1Q9Y6S9 549 aa13.23□□□□□ -0.29
MRPL55-224ENST00000464148 K7EM74 188 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 PSMD11O00231 422 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 TEAD1P28347 426 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 SOX5P35711 763 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 DLSTP36957 453 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 UQCRFS1P47985 274 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 HHEXQ03014 270 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 IL10RBQ08334 325 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 ERV3-1Q14264 604 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 LBRQ14739 615 aaKnown RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 SYCP1Q15431 976 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 CLEC16AQ2KHT3 1053 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 FHL5Q5TD97 284 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 ARHGAP36Q6ZRI8 547 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 PHF13Q86YI8 300 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 GALNT13Q8IUC8 556 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 LZTR1Q8N653 840 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 SCARF2Q96GP6 870 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-224ENST00000464148 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 NLRC4Q9NPP4 1024 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 CD84Q9UIB8 345 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 PHTF1Q9UMS5 762 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 AP4E1Q9UPM8 1137 aa13.22□□□□□ -0.29
MRPL55-224ENST00000464148 CENPEQ02224 2701 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 ENO4A6NNW6 628 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 TTLL8A6PVC2 850 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 HTRA2O43464 458 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-224ENST00000464148 SOCS5O75159 536 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 KATNA1O75449 491 aa13.21□□□□□ -0.29
MRPL55-224ENST00000464148 DLGAP3O95886 979 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms