RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 LYSMD3Q7Z3D4 306 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 TRIM74Q86UV6 250 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
XRN1-203ENST00000463916 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 ACTL9Q8TC94 416 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 IFI44Q8TCB0 444 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 HTR3CQ8WXA8 447 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 QKIQ96PU8 341 aaKnown RBP eCLIP12.93□□□□□ -0.342e-27■■■■■ 45.7
XRN1-203ENST00000463916 RIOK2Q9BVS4 552 aaKnown RBP12.93□□□□□ -0.34
XRN1-203ENST00000463916 ADGRE3Q9BY15 652 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 FRMD8Q9BZ67 464 aaPredicted RBP12.93□□□□□ -0.34
XRN1-203ENST00000463916 PHPT1Q9NRX4 125 aaPredicted RBP12.93□□□□□ -0.34
XRN1-203ENST00000463916 KCTD5Q9NXV2 234 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 SIRPGQ9P1W8 387 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 MOSPD1Q9UJG1 213 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
XRN1-203ENST00000463916 EME2A4GXA9 379 aaPredicted RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 OPA1O60313 960 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 RBL1P28749 1068 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 GPR1P46091 355 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 OTUD4Q01804 1114 aaKnown RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 CDK18Q07002 472 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 NOMO1Q15155 1222 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 ATL2Q8NHH9 583 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 OXNAD1Q96HP4 312 aaPredicted RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 EFR3BQ9Y2G0 817 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 RP1P56715 2156 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 AURKAO14965 403 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 KELP23276 732 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 PTPN7P35236 360 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 SPINT3P49223 89 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 KDELC1Q6UW63 502 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 ZNF765Q7L2R6 523 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 PID1Q7Z2X4 250 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 EFL1Q7Z2Z2 1120 aaKnown RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 PEX26Q7Z412 305 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 NLRP8Q86W28 1048 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 KYQ8NBH2 561 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 CARS2Q9HA77 564 aaKnown RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 KLHL8Q9P2G9 620 aaPredicted RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 GULP1Q9UBP9 304 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 AMFRQ9UKV5 643 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 CNOT6Q9ULM6 557 aaKnown RBP12.92□□□□□ -0.34
XRN1-203ENST00000463916 SUFUQ9UMX1 484 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 DOLKQ9UPQ8 538 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 SLC17A4Q9Y2C5 497 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 SPO11Q9Y5K1 396 aa12.92□□□□□ -0.34
XRN1-203ENST00000463916 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 HACD1B0YJ81 288 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
XRN1-203ENST00000463916 INPP4BO15327 924 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 DDX3YO15523 660 aaKnown RBP12.91□□□□□ -0.34
XRN1-203ENST00000463916 GP1BAP07359 652 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 TEAD1P28347 426 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 DUSP3P51452 185 aaPredicted RBP12.91□□□□□ -0.34
XRN1-203ENST00000463916 WNT3AP56704 352 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 E2F1Q01094 437 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 XRCC4Q13426 336 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 NR0B2Q15466 257 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 LVRNQ6Q4G3 990 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 ADAMTSL4Q6UY14 1074 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 NRROSQ86YC3 692 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 NRSN1Q8IZ57 195 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 DCBLD1Q8N8Z6 715 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 GPR34Q9UPC5 381 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 CLCA2Q9UQC9 943 aa12.91□□□□□ -0.34
XRN1-203ENST00000463916 PCYT1BQ9Y5K3 369 aaPredicted RBP12.91□□□□□ -0.34
XRN1-203ENST00000463916 LOC285095A0A1B0GVY8 99 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 FADS2P1A8MWK0 482 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 H7C0C1 242 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 MTSS1O43312 755 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 KRT37O76014 449 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 MT-CO3P00414 261 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 CHRNA4P43681 627 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 ATP5OP48047 213 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 HENMT1Q5T8I9 393 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 CCDC181Q5TID7 509 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 CDCP2Q5VXM1 449 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 DOK6Q6PKX4 331 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 GKN2Q86XP6 184 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 SDR16C5Q8N3Y7 309 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 FAM46DQ8NEK8 389 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 COX14Q96I36 57 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 FCRL5Q96RD9 977 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 ZFYVE1Q9HBF4 777 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 MAGEE1Q9HCI5 957 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 SPATS2LQ9NUQ6 558 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms