RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 HSPA4LO95757 839 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 LATS1O95835 1130 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 PEX11BO96011 259 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 IGLV3-27P01718 113 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 AHSGP02765 367 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 SLC35E2BP0CK96 405 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ACADSP16219 412 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 TPH1P17752 444 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 CORO1AP31146 461 aaKnown RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 SERPINB5P36952 375 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 PAPOLAP51003 745 aaKnown RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 RENBPP51606 427 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ACTR3P61158 418 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 BTKQ06187 659 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 SLC34A1Q06495 639 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 RING1Q06587 406 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 MTAPQ13126 283 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 NAIF1Q69YI7 327 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ADGRG6Q86SQ4 1221 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ETFBKMTQ8IXQ9 262 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 FAM217AQ8IXS0 508 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ULK2Q8IYT8 1036 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 CPXM2Q8N436 756 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 TEX26Q8N6G2 289 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ATP6V0D2Q8N8Y2 350 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 C2CD4AQ8NCU7 369 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 SPATA22Q8NHS9 363 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 CALML6Q8TD86 181 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 N4BP2L2Q92802 583 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 STMN2Q93045 179 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 AZIN2Q96A70 460 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 IMP4Q96G21 291 aaKnown RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF419Q96HQ0 510 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 NAF1Q96HR8 494 aaKnown RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 MRGPRX2Q96LB1 330 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 MYCBPQ99417 103 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 FICDQ9BVA6 458 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 GATA5Q9BWX5 397 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ILKAPQ9H0C8 392 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF358Q9NW07 568 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 RBM22Q9NW64 420 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 SPATA6Q9NWH7 488 aaPredicted RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 VTI1BQ9UEU0 232 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 IPO11Q9UI26 975 aaKnown RBP9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ACOT9Q9Y305 439 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 MYOFQ9NZM1 2061 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 HEATR9A2RTY3 570 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 MSI1O43347 362 aaKnown RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CCNT2O60583 730 aaKnown RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ATG13O75143 517 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 FKBP6O75344 327 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 MT-CYBP00156 380 aaPredicted RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 EGFP01133 1207 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 HMBSP08397 361 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ARNTP27540 789 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 GABRB3P28472 473 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CXCL12P48061 93 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 SLC6A11P48066 632 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 COPAP53621 1224 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 RAB10P61026 200 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 IRF9Q00978 393 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 POU4F1Q01851 419 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 NHLH1Q02575 133 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 KDSRQ06136 332 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 PRKAA1Q13131 559 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 RCN2Q14257 317 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 USP10Q14694 798 aaKnown RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 RCN1Q15293 331 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 TAF11Q15544 211 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 DLG2Q15700 870 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF528Q3MIS6 628 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 PIK3R6Q5UE93 754 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 AAGABQ6PD74 315 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 NAPRTQ6XQN6 538 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 MYLK4Q86YV6 388 aaPredicted RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 DENND1CQ8IV53 801 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 IPMKQ8NFU5 416 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 USP33Q8TEY7 942 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 WDR60Q8WVS4 1066 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 PEX13Q92968 403 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 TADA1Q96BN2 335 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CNDP1Q96KN2 507 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 FSD1LQ9BXM9 530 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ZYG11BQ9C0D3 744 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 NOL6Q9H6R4 1146 aaKnown RBP9.91□□□□□ -0.82
PTPRD-207ENST00000463477 CAB39LQ9H9S4 337 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 MRGBPQ9NV56 204 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 UBP1Q9NZI7 540 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 FBXO10Q9UK96 956 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 ANGPTL2Q9UKU9 493 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
PTPRD-207ENST00000463477 DMDP11532 3685 aa9.9□□□□□ -0.82
PTPRD-207ENST00000463477 FAM95CA0A1B0GW59 222 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms