RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CTU1Q7Z7A3 348 aaKnown RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 ADGRA1Q86SQ6 560 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 SDCCAG8Q86SQ7 713 aaPredicted RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 CCDC190Q86UF4 302 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 SCYL3Q8IZE3 742 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 SPATA6LQ8N4H0 392 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 MINDY1Q8N5J2 469 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ARFGAP1Q8N6T3 406 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 HJURPQ8NCD3 748 aaPredicted RBP3.21□□□□□ -1.9
VCL-203ENST00000461383 C7orf57Q8NEG2 295 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ENGASEQ8NFI3 743 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 GSDMBQ8TAX9 411 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 TMEM163Q8TC26 289 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 TRIB2Q92519 343 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 APOLD1Q96LR9 279 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 ACOX2Q99424 681 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 MSTO1Q9BUK6 570 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PPP1R3EQ9H7J1 279 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 DNAJC18Q9H819 358 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 LTB4R2Q9NPC1 389 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 COPG2Q9UBF2 871 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 HEY2Q9UBP5 337 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 OR14J1Q9UGF5 321 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 PCDHA12Q9UN75 941 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 TRPV2Q9Y5S1 764 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 STON1Q9Y6Q2 735 aa3.21□□□□□ -1.9
VCL-203ENST00000461383 KANSL1LA0AUZ9 987 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 CCER2I3L3R5 266 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 CLGNO14967 610 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ASAP2O43150 1006 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 LDB2O43679 373 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ATG13O75143 517 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 CSPG5O95196 566 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 EGFP01133 1207 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 CELA2AP08217 269 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 CYC1P08574 325 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MYBL1P10243 752 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MMP9P14780 707 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ARSBP15848 533 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 DDX5P17844 614 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 UBA1P22314 1058 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 CD38P28907 300 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 HOXC9P31274 260 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 RPL3P39023 403 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 THPOP40225 353 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 EIF2S3P41091 472 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 MSH2P43246 934 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 RASSF2P50749 326 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 SELENOVP59797 346 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ZP1P60852 638 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 PPATQ06203 517 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MYBPC2Q14324 1141 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 EIF2S3LQ2VIR3 472 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 FSCBQ5H9T9 825 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MTX3Q5HYI7 312 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ERMARDQ5T6L9 678 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ADALQ6DHV7 355 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 TYW3Q6IPR3 259 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 ZNF367Q7RTV3 350 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 VSIG1Q86XK7 387 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MMP21Q8N119 569 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 C16orf52Q8NHV5 167 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 DENND1AQ8TEH3 1009 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 PIGOQ8TEQ8 1089 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 IGFBPL1Q8WX77 278 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 SLC25A28Q96A46 364 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 PTERQ96BW5 349 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 TMCO6Q96DC7 493 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 KXD1Q9BQD3 176 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 MMTAG2Q9BU76 263 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 CCDC106Q9BWC9 280 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 OR10A4Q9H209 315 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 PIGMQ9H3S5 423 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 EPB41L5Q9HCM4 733 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 ZCCHC17Q9NP64 241 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 MKKSQ9NPJ1 570 aaPredicted RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 SH3GLB2Q9NR46 395 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 PTGFRNQ9P2B2 879 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 STK39Q9UEW8 545 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 GIMAP2Q9UG22 337 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 PADI1Q9ULC6 663 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 NOL7Q9UMY1 257 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 CDC14AQ9UNH5 594 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 EXO1Q9UQ84 846 aaKnown RBP3.2□□□□□ -1.9
VCL-203ENST00000461383 CLIC4Q9Y696 253 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 TTC3P53804 2025 aa3.2□□□□□ -1.9
VCL-203ENST00000461383 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 RPS10-NUDT3A0A1W2PQS6 291 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 CPED1A4D0V7 1026 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 EIF4E1BA6NMX2 242 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 VWA5AO00534 786 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 UBE2CO00762 179 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ZIC3O60481 467 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 PPFIA2O75334 1257 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 EPN2O95208 641 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 HSPA4LO95757 839 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TPOP07202 933 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 HSP90AB1P08238 724 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms