RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FUT10Q6P4F1 479 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 GJB7Q6PEY0 223 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 LVRNQ6Q4G3 990 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 SCARA5Q6ZMJ2 495 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 STXBP4Q6ZWJ1 553 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TRAPPC11Q7Z392 1133 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 PALB2Q86YC2 1186 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ZC3H3Q8IXZ2 948 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 HACE1Q8IYU2 909 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CACNA2D3Q8IZS8 1091 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 VPS52Q8N1B4 723 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CSGALNACT2Q8N6G5 542 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 C12orf76Q8N812 135 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 ATG16L2Q8NAA4 619 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 STKLD1Q8NE28 680 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 NLGN4YQ8NFZ3 816 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TAS1R2Q8TE23 839 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 RSPH1Q8WYR4 309 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 C18orf8Q96DM3 657 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TSG101Q99816 390 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 NDC1Q9BTX1 674 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 SDCBP2Q9H190 292 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 CHST8Q9H2A9 424 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 SMYD3Q9H7B4 428 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 OBP2BQ9NPH6 170 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TM7SF3Q9NS93 570 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 INTS13Q9NVM9 706 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 RLIMQ9NVW2 624 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TAB2Q9NYJ8 693 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 SPG21Q9NZD8 308 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 JKAMPQ9P055 326 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 LRFN1Q9P244 771 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 HOOK1Q9UJC3 728 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 TMED5Q9Y3A6 229 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 HS3ST4Q9Y661 456 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 MTCH2Q9Y6C9 303 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 DNAH14Q0VDD8 3507 aa4.96□□□□□ -1.62
ATPAF1-203ENST00000460928 VPS13AQ96RL7 3174 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LGALS16A8MUM7 142 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 EFCAB8A8MWE9 144 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 M0R3H8 397 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PIRO00625 290 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 NPC1O15118 1278 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CETN3O15182 167 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 POLR3GO15318 223 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ATP2C2O75185 946 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SOAT2O75908 522 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 VNN2O95498 520 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CXCL14O95715 111 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CAVIN2O95810 425 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 WEE2P0C1S8 567 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM191BP0C7N4 346 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 DHRS4L1P0CG22 281 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 EPCAMP16422 314 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 DESP17661 470 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LAG3P18627 525 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 NR4A1P22736 598 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MCM3P25205 808 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LMO2P25791 158 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PSMC2P35998 433 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 NRIP1P48552 1158 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CARSP49589 748 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 VAMP7P51809 220 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LILRA4P59901 499 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 FKBP3Q00688 224 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 HYAL1Q12794 435 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL49Q13405 166 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PTPN14Q15678 1187 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 STX1AQ16623 288 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 EDRF1Q3B7T1 1238 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 WSCD1Q658N2 575 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF529Q6P280 563 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 DCLRE1AQ6PJP8 1040 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LUZP1Q86V48 1076 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PDSS2Q86YH6 399 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 DHX40Q8IX18 779 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MPP5Q8N3R9 675 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC15A4Q8N697 577 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIML1Q8N9V2 468 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MLKLQ8NB16 471 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 BEST2Q8NFU1 509 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC35B2Q8TB61 432 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 GIMAP1Q8WWP7 306 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC35C1Q96A29 364 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 LRRC46Q96FV0 321 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SENP8Q96LD8 212 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CNOT6LQ96LI5 555 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TBATAQ96M53 351 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC114Q96M63 670 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 FNBP1Q96RU3 617 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 RUFY1Q96T51 708 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 RTP3Q9BQQ7 232 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL45Q9BRJ2 306 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL9Q9BYD2 267 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ZBP1Q9H171 429 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 MAGEH1Q9H213 219 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms