RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PLSCR4Q9NRQ2 329 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 SETD4Q9NVD3 440 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 SUCLA2Q9P2R7 463 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 TINAGQ9UJW2 476 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 AGO1Q9UL18 857 aaKnown RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 ZNF215Q9UL58 517 aaPredicted RBP3.44□□□□□ -1.86
RFC4-211ENST00000460408 SQORQ9Y6N5 450 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 SESN1Q9Y6P5 492 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 ARHGEF11O15085 1522 aa3.44□□□□□ -1.86
RFC4-211ENST00000460408 A0A1W2PR77 199 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 C1orf226A1L170 272 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 CYSRT1A8MQ03 144 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 ZIC3O60481 467 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 DAB1O75553 588 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 JRKO75564 520 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 OAZ2O95190 189 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 RB1P06400 928 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 G6PDP11413 515 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 TAS2R40P59535 323 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 MRPS34P82930 218 aaKnown RBP3.43□□□□□ -1.86
RFC4-211ENST00000460408 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 LRIF1Q5T3J3 769 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 NEUROD6Q96NK8 337 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 SERINC2Q96SA4 455 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
RFC4-211ENST00000460408 SLC28A3Q9HAS3 691 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 CLIC5Q9NZA1 410 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 CWC15Q9P013 229 aaKnown RBP3.43□□□□□ -1.86
RFC4-211ENST00000460408 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 RCOR1Q9UKL0 485 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 CDC14AQ9UNH5 594 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 CLIC4Q9Y696 253 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 ARHGEF40Q8TER5 1519 aa3.43□□□□□ -1.86
RFC4-211ENST00000460408 THOC2Q8NI27 1593 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 A0A1W2PQ09 198 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 CD8B2A6NJW9 211 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 AKR1B15C9JRZ8 316 aaPredicted RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 NDUFS7O75251 213 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 TSPAN9O75954 239 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 DDNO94850 711 aaPredicted RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 CRYABP02511 175 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 TUBBP07437 444 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 CLTBP09497 229 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 PON1P27169 355 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 HOXD3P31249 432 aaPredicted RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 HOXC9P31274 260 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 RPL3P39023 403 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 PIK3CAP42336 1068 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 RAD52P43351 418 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 CAMPP49913 170 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 GALCP54803 685 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 PSMC6P62333 389 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 BNC1Q01954 994 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 ACSM2AQ08AH3 577 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 CHAF1BQ13112 559 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 TRAF3Q13114 568 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 KCTD2Q14681 263 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 DAB2IPQ5VWQ8 1189 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 GGNBP1Q5YKI7 109 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 ACSM2BQ68CK6 577 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 C9orf47Q6ZRZ4 202 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 ENOSF1Q7L5Y1 443 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 TAOK1Q7L7X3 1001 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 GALNT5Q7Z7M9 940 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 ZC3HC1Q86WB0 502 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 HACE1Q8IYU2 909 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 TRPC4APQ8TEL6 797 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 OIT3Q8WWZ8 545 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 EGLN2Q96KS0 407 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 SH3GL2Q99962 352 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 SRSF8Q9BRL6 282 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 SLC25A33Q9BSK2 321 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 PCGF1Q9BSM1 259 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 VPS33BQ9H267 617 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 NDST4Q9H3R1 872 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 PLK3Q9H4B4 646 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 SMARCAD1Q9H4L7 1026 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 CNGB3Q9NQW8 809 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 MTMR10Q9NXD2 777 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 WSB2Q9NYS7 404 aaPredicted RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 OGFRQ9NZT2 677 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 SLC9A2Q9UBY0 812 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 ACSL5Q9ULC5 683 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 PCDHGB4Q9UN71 923 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 RABGAP1Q9Y3P9 1069 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 SNX8Q9Y5X2 465 aa3.42□□□□□ -1.86
RFC4-211ENST00000460408 TCF20Q9UGU0 1960 aaKnown RBP3.42□□□□□ -1.86
RFC4-211ENST00000460408 A0A0U1RQJ8 604 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 ATP2A1O14983 1001 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 PLRG1O43660 514 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 HS6ST1O60243 411 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 TPPPO94811 219 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 CH25HO95992 272 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 ALPLP05186 524 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 SRPRAP08240 638 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 HOXC6P09630 235 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 TMEM11P17152 192 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 SCP2P22307 547 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 GCH1P30793 250 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms