RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 RAPGEF5Q92565 580 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CCDC74AQ96AQ1 378 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 AP2M1Q96CW1 435 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 OLFM3Q96PB7 478 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 UBL7Q96S82 380 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CHP1Q99653 195 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 LGR4Q9BXB1 951 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 TMEM168Q9H0V1 697 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ABCG8Q9H221 673 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PRORYQ9H606 182 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 RMI1Q9H9A7 625 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 CYP4F12Q9HCS2 524 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 GULP1Q9UBP9 304 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 ACSL6Q9UKU0 697 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 PCDHGA7Q9Y5G6 932 aa9.98□□□□□ -0.81
HDLBP-228ENST00000459788 TEX51A0A1B0GUA7 166 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 TTC24A2A3L6 582 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 CDRT15L2A8MXV6 281 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 ZNF189O75820 626 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 PRLP01236 227 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 HLA-DQB2P05538 268 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 GJC1P36383 396 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 GPR1P46091 355 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 DCDC1P59894 354 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 DSC2Q02487 901 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 BROXQ5VW32 411 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 C19orf48Q6RUI8 117 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 AVL9Q8NBF6 648 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 DTX3LQ8TDB6 740 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 SNRNP27Q8WVK2 155 aaKnown RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 TADA1Q96BN2 335 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 IMP4Q96G21 291 aaKnown RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 WBP1Q96G27 269 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 COX14Q96I36 57 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 VAT1Q99536 393 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 MLPHQ9BV36 600 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 SLC25A51Q9H1U9 297 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 LRRN3Q9H3W5 708 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 CARS2Q9HA77 564 aaKnown RBP9.97□□□□□ -0.81
HDLBP-228ENST00000459788 MAGEE1Q9HCI5 957 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 PKD2L2Q9NZM6 624 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
HDLBP-228ENST00000459788 MGAQ8IWI9 3026 aa9.96□□□□□ -0.81
HDLBP-228ENST00000459788 ZNF106Q9H2Y7 1883 aaKnown RBP9.96□□□□□ -0.81
HDLBP-228ENST00000459788 SMG1Q96Q15 3661 aaKnown RBP9.96□□□□□ -0.81
HDLBP-228ENST00000459788 A8MX80 341 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SOD1P00441 154 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 EPOP01588 193 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 JCHAINP01591 159 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 MPOP05164 745 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 MMP2P08253 660 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 MYF5P13349 255 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SLC2A4P14672 509 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SPINT3P49223 89 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 PDX1P52945 283 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 INHBCP55103 352 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 TLE3Q04726 772 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 ZFP36L1Q07352 338 aaKnown RBP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 NIPAL4Q0D2K0 466 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 TRA2AQ13595 282 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 HENMT1Q5T8I9 393 aaKnown RBP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 C11orf63Q6NUN7 778 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SPRED1Q7Z699 444 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 TSPAN33Q86UF1 283 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 NT5DC3Q86UY8 548 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 CCNJLQ8IV13 435 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 KATNAL2Q8IYT4 538 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 PELI3Q8N2H9 469 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 TC2NQ8N9U0 490 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 ATXN7L3BQ96GX2 97 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 PRR11Q96HE9 360 aaPredicted RBP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 MRFAP1L1Q96HT8 127 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 OR2M4Q96R27 311 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 LGMNQ99538 433 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 TRIM5Q9C035 493 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 DPEP2Q9H4A9 486 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 CAAP1Q9H8G2 361 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 MRPL40Q9NQ50 206 aaKnown RBP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SPTLC3Q9NUV7 552 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SIRPGQ9P1W8 387 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 LRIT1Q9P2V4 623 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SUFUQ9UMX1 484 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SATB2Q9UPW6 733 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 CHKBQ9Y259 395 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 EFR3BQ9Y2G0 817 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDLBP-228ENST00000459788 LOC400499M0QZD8 3231 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 KALRNO60229 2985 aa9.96□□□□□ -0.82
HDLBP-228ENST00000459788 C1orf232A0A0U1RR37 186 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 A0A1W2PQM1 296 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 HACD1B0YJ81 288 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 PLD2O14939 933 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 HGSO14964 777 aaPredicted RBP9.95□□□□□ -0.82
HDLBP-228ENST00000459788 NVLO15381 856 aaKnown RBP9.95□□□□□ -0.82
HDLBP-228ENST00000459788 SPOPO43791 374 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 CPNE6O95741 557 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 KRT1P04264 644 aa9.95□□□□□ -0.82
HDLBP-228ENST00000459788 FGF1P05230 155 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms