RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ADAMTSL4Q6UY14 1074 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 ZNF574Q6ZN55 896 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-220ENST00000458038 TECPR1Q7Z6L1 1165 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 NAGSQ8N159 534 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 NUDT22Q9BRQ3 303 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 SUDS3Q9H7L9 328 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-220ENST00000458038 HAUS2Q9NVX0 235 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 GOLGA6AQ9NYA3 693 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 DNPEPQ9ULA0 475 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 HECTD1Q9ULT8 2610 aa21.46■■□□□ 1.03
CPNE1-220ENST00000458038 SMTNL1A8MU46 457 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 LHCGRP22888 699 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 IL1R2P27930 398 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 CSTF2P33240 577 aaKnown RBP eCLIP21.45■■□□□ 1.022e-45■■■■■ 66.1
CPNE1-220ENST00000458038 GPR1P46091 355 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 GPLD1P80108 840 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 SRSF6Q13247 344 aaKnown RBP21.45■■□□□ 1.02
CPNE1-220ENST00000458038 TBR1Q16650 682 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 ATG14Q6ZNE5 492 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 ZNF765Q7L2R6 523 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 VASH2Q86V25 355 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 PIH1D2Q8WWB5 315 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 HSPH1Q92598 858 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 CCDC74BQ96LY2 380 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 BPIFA3Q9BQP9 254 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 ASPSCR1Q9BZE9 553 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.45■■□□□ 1.02
CPNE1-220ENST00000458038 ETNK2Q9NVF9 386 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 RCOR3Q9P2K3 495 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-220ENST00000458038 MYO1AQ9UBC5 1043 aa21.45■■□□□ 1.02
CPNE1-220ENST00000458038 PPM1DO15297 605 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 MBD3O95983 291 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 RARAP10276 462 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 FGF3P11487 239 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-220ENST00000458038 CCL4P13236 92 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 ACTR1BP42025 376 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 ACTR1AP61163 376 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 LRP8Q14114 963 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 SMTNL2Q2TAL5 461 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 TEX26Q8N6G2 289 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 NIPA2Q8N8Q9 360 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 AP2M1Q96CW1 435 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 OR2M4Q96R27 311 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 DDA1Q9BW61 102 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 IL17BQ9UHF5 180 aa21.44■■□□□ 1.02
CPNE1-220ENST00000458038 BZW2Q9Y6E2 419 aaKnown RBP21.44■■□□□ 1.02
CPNE1-220ENST00000458038 UBR5O95071 2799 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-220ENST00000458038 IGHV1OR21-1A0A087WYE8 117 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 AGRPO00253 132 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 ITGB6P18564 788 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 FASLGP48023 281 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 POLD2P49005 469 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 MAXP61244 160 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 TYRO3Q06418 890 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 TSPAN33Q86UF1 283 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 NRSN1Q8IZ57 195 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 RCBTB1Q8NDN9 531 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 POLR1EQ9GZS1 481 aaKnown RBP21.43■■□□□ 1.02
CPNE1-220ENST00000458038 ABCG8Q9H221 673 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 ADNPQ9H2P0 1102 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 GEMIN8Q9NWZ8 242 aaKnown RBP21.43■■□□□ 1.02
CPNE1-220ENST00000458038 KCNK4Q9NYG8 393 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 AMACRQ9UHK6 382 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 ST14Q9Y5Y6 855 aa21.43■■□□□ 1.02
CPNE1-220ENST00000458038 B4E171 279 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 CAPN5O15484 640 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-220ENST00000458038 PPFIA2O75334 1257 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 FAM87AP0C7U9 286 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 TSPAN7P41732 249 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 EPHB1P54762 984 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 RAB15P59190 212 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 PTSQ03393 145 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 PYCR3Q53H96 274 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 TMEM71Q6P5X7 295 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 IL22RA1Q8N6P7 574 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 EXD1Q8NHP7 514 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 PATE1Q8WXA2 126 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 NKD1Q969G9 470 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 TEFMQ96QE5 360 aaKnown RBP21.42■■□□□ 1.02
CPNE1-220ENST00000458038 PCDH18Q9HCL0 1135 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 NT5MQ9NPB1 228 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 IP6K2Q9UHH9 426 aa21.42■■□□□ 1.02
CPNE1-220ENST00000458038 A0A0J9YYE9 177 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 SUV39H1O43463 412 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 FZD6O60353 706 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 TRBC1P01850 177 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 THRAP10827 490 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 CA4P22748 312 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 FIGNQ5HY92 759 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 E4F1Q66K89 784 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-220ENST00000458038 LRRC66Q68CR7 880 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 ALG1LQ6GMV1 187 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 TIGD7Q6NT04 549 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-220ENST00000458038 DOK6Q6PKX4 331 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 GALNT13Q8IUC8 556 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 OR10G6Q8NH81 332 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 PTCD2Q8WV60 388 aaKnown RBP21.41■■□□□ 1.02
CPNE1-220ENST00000458038 FATE1Q969F0 183 aa21.41■■□□□ 1.02
CPNE1-220ENST00000458038 AHCYL2Q96HN2 611 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 351.9 ms