RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ISL2Q96A47 359 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 FAM136AQ96C01 138 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 PKNOX2Q96KN3 472 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 LYSMD1Q96S90 227 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 CCDC77Q9BR77 488 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 BOCQ9BWV1 1114 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 CAAP1Q9H8G2 361 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 MAGEE1Q9HCI5 957 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 IL26Q9NPH9 171 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 CD84Q9UIB8 345 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 ADAM21Q9UKJ8 722 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 RIMKLBQ9ULI2 386 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 COQ6Q9Y2Z9 468 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 PRSS21Q9Y6M0 314 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 XIRP2A4UGR9 3374 aa8.72□□□□□ -1.01
RIF1-208ENST00000457745 EDDM13A0A1B0GTR0 161 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 A0A1W2PQF6 199 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 GOLGA6L10A6NI86 522 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 UPK3BL1B0FP48 263 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 UPK3BL2E5RIL1 263 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 KPNA3O00505 521 aaPredicted RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 CD3EAPO15446 510 aaKnown RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 APODP05090 189 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ATP5BP06576 529 aaKnown RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 EPHX1P07099 455 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 SNRPAP09012 282 aaKnown RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 SLC35E2BP0CK96 405 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 MMP12P39900 470 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 EIF2DP41214 584 aaKnown RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 ETV4P43268 484 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 STC1P52823 247 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 COPAP53621 1224 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 EPHB1P54762 984 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 B4GALNT1Q00973 533 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 NAB1Q13506 487 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 DBN1Q16643 649 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 UGP2Q16851 508 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 TYSND1Q2T9J0 566 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ZNF805Q5CZA5 627 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 CTSL3PQ5NE16 218 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 PIP5KL1Q5T9C9 394 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ZNF449Q6P9G9 518 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 SERPINA13PQ6UXR4 307 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 TIFABQ6ZNK6 161 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 DPPA4Q7L190 304 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 CLEC14AQ86T13 490 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 CBARPQ8N350 705 aaPredicted RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 GOLGA6L1Q8N7Z2 621 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ZNF513Q8N8E2 541 aaPredicted RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 ZNF557Q8N988 423 aaPredicted RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 IL17RCQ8NAC3 791 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 GDAP1Q8TB36 358 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 TCP10LQ8TDR4 215 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ANKRD49Q8WVL7 239 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 LPGAT1Q92604 370 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 HLA-CQ95604 372 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 SCAMP4Q969E2 229 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 SCRN2Q96FV2 425 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ZNF641Q96N77 438 aaPredicted RBP8.71□□□□□ -1.02
RIF1-208ENST00000457745 GPR22Q99680 433 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 CPNE1Q99829 537 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 OMDQ99983 421 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 C1QTNF1Q9BXJ1 281 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 GPR63Q9BZJ6 419 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 RHOJQ9H4E5 214 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 ACSS2Q9NR19 701 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 SLC39A10Q9ULF5 831 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 PHTF1Q9UMS5 762 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 CRYL1Q9Y2S2 319 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 STARD13Q9Y3M8 1113 aa8.71□□□□□ -1.02
RIF1-208ENST00000457745 BPTFQ12830 3046 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 FAM95CA0A1B0GW59 222 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 KRBA1A5PL33 1030 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 IQCF5A8MTL0 148 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 FADS2P1A8MWK0 482 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 H7C0S8 307 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 AP3B1O00203 1094 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 AREL1O15033 823 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MID1O15344 667 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 SHOX2O60902 331 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 KLF8O95600 359 aaPredicted RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 SOD1P00441 154 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MT-ND3P03897 115 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 SAT1P21673 171 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 ARRB2P32121 409 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 VIPR1P32241 457 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 HMGCLP35914 325 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MDH1P40925 334 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 ETV3P41162 512 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 MAPK8P45983 427 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 LEPRP48357 1165 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 SEC24CP53992 1094 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 RPL26P61254 145 aaKnown RBP8.7□□□□□ -1.02
RIF1-208ENST00000457745 GNGT1P63211 74 aa8.7□□□□□ -1.02
RIF1-208ENST00000457745 PRAMEP78395 509 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms