RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SNAP91O60641 907 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 KERAO60938 352 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 RHOBTB1O94844 696 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 C1RP00736 705 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ATP4BP51164 291 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ATP6V0D1P61421 351 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 STX5Q13190 355 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 GSTA3Q16772 222 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 UGT3A2Q3SY77 523 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 SPOUT1Q5T280 376 aaKnown RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 LINGO4Q6UY18 593 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 LARP4Q71RC2 724 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 ZFRQ96KR1 1074 aaKnown RBP16.63■□□□□ 0.25
CCDC43-202ENST00000457422 CCDC68Q9H2F9 335 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 VCX3BQ9H321 246 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 BCAP29Q9UHQ4 241 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 OGDHLQ9ULD0 1010 aa16.63■□□□□ 0.25
CCDC43-202ENST00000457422 H7C0S8 307 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 UBXN8O00124 270 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 NDUFS3O75489 264 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 SRP72O76094 671 aaKnown RBP16.62■□□□□ 0.25
CCDC43-202ENST00000457422 TMCC1O94876 653 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 ENO3P13929 434 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-202ENST00000457422 FMO4P31512 558 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 DPP6P42658 865 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 PSMD8P48556 350 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 XIAPP98170 497 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 CEACAM7Q14002 265 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 PPP1R3AQ16821 1122 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 INO80DQ53TQ3 878 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-202ENST00000457422 CLEC6AQ6EIG7 209 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 NCEH1Q6PIU2 408 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 GK5Q6ZS86 529 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 HERC2P3Q9BVR0 1158 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 ADAMTS6Q9UKP5 1117 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 OAS3Q9Y6K5 1087 aaKnown RBP16.62■□□□□ 0.25
CCDC43-202ENST00000457422 KIAA1671Q9BY89 1806 aa16.62■□□□□ 0.25
CCDC43-202ENST00000457422 GFRA2O00451 464 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 CDK14O94921 469 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 MBL2P11226 248 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 RAG1P15918 1043 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TWF1Q12792 350 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TRAF2Q12933 501 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 RAB33AQ14088 237 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 IKBKEQ14164 716 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PAQR3Q6TCH7 311 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TMEM150AQ86TG1 271 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 SLC39A11Q8N1S5 342 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 BIRC8Q96P09 236 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 NPAS2Q99743 824 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 MRPL1Q9BYD6 325 aaKnown RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 HACD3Q9P035 362 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 LHX3Q9UBR4 397 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 SARDHQ9UL12 918 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PSMD12O00232 456 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PFDN6O15212 129 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TBL1XO60907 577 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 GPC4O75487 556 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 XRCC1P18887 633 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 ME2P23368 584 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 MZF1P28698 734 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TTPAP49638 278 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 ACADVLP49748 655 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 CDKN1CP49918 316 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 NAA20P61599 178 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 SH3BP2P78314 561 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 RAD51Q06609 339 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 FASTKQ14296 549 aaKnown RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PFKFB4Q16877 469 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 CNKSR3Q6P9H4 555 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TMCO2Q7Z6W1 182 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PDSS2Q86YH6 399 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 MFN1Q8IWA4 741 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 CARNMT1Q8N4J0 409 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 TTC30BQ8N4P2 665 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 NKAPQ8N5F7 415 aaKnown RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 EFHBQ8N7U6 833 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 MICAL1Q8TDZ2 1067 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-202ENST00000457422 FKBPLQ9UIM3 349 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 PSMD13Q9UNM6 376 aa16.61■□□□□ 0.25
CCDC43-202ENST00000457422 LRRC14BA6NHZ5 514 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PRRG1O14668 218 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 CFLARO15519 480 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 SIX3O95343 332 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PYGLP06737 847 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 VEGFBP49765 207 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 CLCN4P51793 760 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 CDH13P55290 713 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 TLE2Q04725 743 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 FLOT2Q14254 428 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 PTPRRQ15256 657 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 ZFP1Q6P2D0 407 aa16.6■□□□□ 0.25
CCDC43-202ENST00000457422 DNAJB7Q7Z6W7 309 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-202ENST00000457422 HJURPQ8NCD3 748 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms