RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TADA1Q96BN2 335 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 HES6Q96HZ4 224 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 GPR63Q9BZJ6 419 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 FAM83DQ9H4H8 585 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 CD84Q9UIB8 345 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 KLK13Q9UKR3 277 aa23.11■■□□□ 1.29
CBX3-204ENST00000456948 PACSIN2Q9UNF0 486 aaPredicted RBP23.11■■□□□ 1.29
CBX3-204ENST00000456948 TMEM202A6NGA9 273 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 YY2O15391 372 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 GP1BAP07359 652 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 JUPP14923 745 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 RBL1P28749 1068 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 SPINT3P49223 89 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 PTPRRQ15256 657 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 SMAD1Q15797 465 aaKnown RBP23.1■■□□□ 1.29
CBX3-204ENST00000456948 UNQ6494/PRO21346Q6UXR6 183 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 TRIB3Q96RU7 358 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 FSD1LQ9BXM9 530 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 ABCG4Q9H172 646 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 TCEAL2Q9H3H9 227 aaPredicted RBP23.1■■□□□ 1.29
CBX3-204ENST00000456948 TRABDQ9H4I3 376 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 CYP4F12Q9HCS2 524 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 UBP1Q9NZI7 540 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 AAR2Q9Y312 384 aaKnown RBP23.1■■□□□ 1.29
CBX3-204ENST00000456948 CAPN6Q9Y6Q1 641 aa23.1■■□□□ 1.29
CBX3-204ENST00000456948 DDX3YO15523 660 aaKnown RBP23.09■■□□□ 1.29
CBX3-204ENST00000456948 KCNN4O15554 427 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 GCATO75600 419 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 GIMD1P0DJR0 217 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 CD68P34810 354 aaPredicted RBP23.09■■□□□ 1.29
CBX3-204ENST00000456948 GEMP55040 296 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 WNT3AP56704 352 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 RPS6KA1Q15418 735 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 C6orf132Q5T0Z8 1188 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 TAF8Q7Z7C8 310 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 HIC2Q96JB3 615 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 RIOK2Q9BVS4 552 aaKnown RBP23.09■■□□□ 1.29
CBX3-204ENST00000456948 LGR4Q9BXB1 951 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 HACD3Q9P035 362 aa23.09■■□□□ 1.29
CBX3-204ENST00000456948 MAP1BP46821 2468 aaKnown RBP23.09■■□□□ 1.29
CBX3-204ENST00000456948 A0A0U1RQJ8 604 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 PRSS38A1L453 326 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 HLA-DPA1P20036 260 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 CCNI2Q6ZMN8 369 aaPredicted RBP23.08■■□□□ 1.29
CBX3-204ENST00000456948 OR1E3Q8WZA6 343 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 NAT6Q93015 286 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 SCAMP4Q969E2 229 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 SMIM14Q96QK8 99 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 BOCQ9BWV1 1114 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 CLPBQ9H078 707 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 GBA3Q9H227 469 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 CARS2Q9HA77 564 aaKnown RBP23.08■■□□□ 1.29
CBX3-204ENST00000456948 FGF22Q9HCT0 170 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 LZTFL1Q9NQ48 299 aa23.08■■□□□ 1.29
CBX3-204ENST00000456948 LOC285095A0A1B0GVY8 99 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 TMEM8BA6NDV4 472 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 PROS1P07225 676 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 ILF3Q12906 894 aaKnown RBP eCLIP23.07■■□□□ 1.281e-7■■■■□ 21.9
CBX3-204ENST00000456948 ANKRD20A2Q5SQ80 823 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 ANKRD20A1Q5TYW2 823 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 ANKRD20A3Q5VUR7 823 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 ZDHHC20Q5W0Z9 365 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 LYSMD3Q7Z3D4 306 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 IPMKQ8NFU5 416 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 TRIM58Q8NG06 486 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 OR6C4Q8NGE1 309 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 PDXPQ96GD0 296 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 GSDMCQ9BYG8 508 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 FRMD8P1Q9BZ68 369 aaPredicted RBP23.07■■□□□ 1.28
CBX3-204ENST00000456948 TRNAU1APQ9NX07 287 aaKnown RBP23.07■■□□□ 1.28
CBX3-204ENST00000456948 GULP1Q9UBP9 304 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 PNMA8BQ9ULN7 279 aaPredicted RBP23.07■■□□□ 1.28
CBX3-204ENST00000456948 GPR34Q9UPC5 381 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 SHOC2Q9UQ13 582 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 ZNF711Q9Y462 761 aa23.07■■□□□ 1.28
CBX3-204ENST00000456948 A0A0U1RQS6 177 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 CPED1A4D0V7 1026 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 ASMTLO95671 621 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 CDKN3Q16667 212 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 AADACL2Q6P093 401 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 TMC3Q7Z5M5 1100 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 ARL10Q8N8L6 244 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 ZSCAN5AQ9BUG6 496 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 FRMD8Q9BZ67 464 aaPredicted RBP23.06■■□□□ 1.28
CBX3-204ENST00000456948 MRPL40Q9NQ50 206 aaKnown RBP23.06■■□□□ 1.28
CBX3-204ENST00000456948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.06■■□□□ 1.28
CBX3-204ENST00000456948 SLC17A4Q9Y2C5 497 aa23.06■■□□□ 1.28
CBX3-204ENST00000456948 FRYQ5TBA9 3013 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 KRT37O76014 449 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 FGF1P05230 155 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 CEACAM5P06731 702 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 IVLP07476 585 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 PDPK2PQ6A1A2 396 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 KDELC1Q6UW63 502 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 ARHGEF18Q6ZSZ5 1173 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 RFLNAQ6ZTI6 216 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 CACTIN-AS1Q8N1I8 211 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 PELI3Q8N2H9 469 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 SLC25A41Q8N5S1 370 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 FAM46DQ8NEK8 389 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms