RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NLGN3Q9NZ94 848 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 HACD3Q9P035 362 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 KLQ9UEF7 1012 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 FTSJ1Q9UET6 329 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 CD84Q9UIB8 345 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 TTC7AQ9ULT0 858 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-205ENST00000454542 PYCARDQ9ULZ3 195 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 AAR2Q9Y312 384 aaKnown RBP14.12□□□□□ -0.15
HDAC4-205ENST00000454542 NCOR2Q9Y618 2525 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 SPTBN2O15020 2390 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 LY6G6EA0A0G2JKS1 128 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 TRIM38O00635 465 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 ENC1O14682 589 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SCAMP1O15126 338 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 AQP9O43315 295 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 TNFSF14O43557 240 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 RASGRP1O95267 797 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 METTL18O95568 372 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 FGGP02679 453 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 FTH1P19P0C7X4 201 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 KELP23276 732 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 HMGCLP35914 325 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 BLKP51451 505 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SIM1P81133 766 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 PPARDQ03181 441 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 MSLNQ13421 630 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 CCNG2Q16589 344 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 ENPP7Q6UWV6 458 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 KDELC2Q7Z4H8 507 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 EID2Q8N6I1 236 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 FAM181AQ8N9Y4 354 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 CCHCR1Q8TD31 782 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 C1orf54Q8WWF1 131 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SCARF2Q96GP6 870 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 FICDQ9BVA6 458 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 RIOK2Q9BVS4 552 aaKnown RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 FSD1LQ9BXM9 530 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 CLPBQ9H078 707 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 ARNT2Q9HBZ2 717 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SPASTQ9UBP0 616 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SHOC2Q9UQ13 582 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 SLC17A4Q9Y2C5 497 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 U3KQA8 63 aa14.11□□□□□ -0.15
HDAC4-205ENST00000454542 TDRD6O60522 2096 aaKnown RBP14.11□□□□□ -0.15
HDAC4-205ENST00000454542 PRSS38A1L453 326 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 GOLGA8CPA6NN73 597 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 FADS2P1A8MWK0 482 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 LMO7DNF2Z398 122 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PDE2AO00408 941 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 CES2O00748 559 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 TPP1O14773 563 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 AURKAO14965 403 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 ATP1A1P05023 1023 aaKnown RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 CEACAM5P06731 702 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 STIP1P31948 543 aaKnown RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 GPR1P46091 355 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 ACADVLP49748 655 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 OLIG2Q13516 323 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PRPSAP1Q14558 356 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PARP6Q2NL67 630 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PDPK2PQ6A1A2 396 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 DENND5AQ6IQ26 1287 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 CCDC70Q6NSX1 233 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 ARHGEF18Q6ZSZ5 1173 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 SDR16C5Q8N3Y7 309 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 FSTL5Q8N475 847 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 GPR26Q8NDV2 337 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 DTX3LQ8TDB6 740 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 TSACCQ96A04 125 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 CNDP2Q96KP4 475 aaKnown RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PLEKHG4BQ96PX9 1271 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 DUSP23Q9BVJ7 150 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 SLC13A1Q9BZW2 595 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 RAD18Q9NS91 495 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 KCND1Q9NSA2 647 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 TRMT1Q9NXH9 659 aaKnown RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 FEZ2Q9UHY8 353 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 CNOT6Q9ULM6 557 aaKnown RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 PCDHGA1Q9Y5H4 931 aa14.1□□□□□ -0.15
HDAC4-205ENST00000454542 COL27A1Q8IZC6 1860 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-205ENST00000454542 BPTFQ12830 3046 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 NEMP2A6NFY4 417 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 SIGLEC6O43699 453 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 KIF5CO60282 957 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 CEP104O60308 925 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 TRIM16O95361 564 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 AP2A1O95782 977 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 AGTP01019 485 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 IVLP07476 585 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 CELA2BP08218 269 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ALPPL2P10696 532 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 BPIP17213 487 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ACP1P24666 158 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 CXCR5P32302 372 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 SHC2P98077 582 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 PRRT3Q5FWE3 981 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ZNF569Q5MCW4 686 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ZCCHC8Q6NZY4 707 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms