RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 GOLGA6BA6NDN3 693 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CDRT15L2A8MXV6 281 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 B4DGG1 531 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 AKR1B15C9JRZ8 316 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 JCHAINP01591 159 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 RPLP0P05388 317 aaKnown RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 IVLP07476 585 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 PNLIPP16233 465 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CA4P22748 312 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 GPR1P46091 355 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 POLD2P49005 469 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 EPHB1P54762 984 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CCL7P80098 99 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CCDC173Q0VFZ6 552 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 COL9A2Q14055 689 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 SARM1Q6SZW1 724 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 NLRP8Q86W28 1048 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CCNJLQ8IV13 435 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 RAVER1Q8IY67 606 aaKnown RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 TC2NQ8N9U0 490 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 LPCAT1Q8NF37 534 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 WDR36Q8NI36 951 aaKnown RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 ZNF830Q96NB3 372 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 LRRN3Q9H3W5 708 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 DPEP2Q9H4A9 486 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 SYNDIG1Q9H7V2 258 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 THSD1Q9NS62 852 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 SPATS2LQ9NUQ6 558 aaKnown RBP12.43□□□□□ -0.42
CPSF4-208ENST00000452047 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 HYOU1Q9Y4L1 999 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 HEY1Q9Y5J3 304 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 RNF215Q9Y6U7 377 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CFAP46Q8IYW2 2715 aa12.43□□□□□ -0.42
CPSF4-208ENST00000452047 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 APOL1O14791 398 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 NUDT21O43809 227 aaKnown RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 CLDN7O95471 211 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 KRT1P04264 644 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 FGF1P05230 155 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 AK4P27144 223 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 CCKBRP32239 447 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 ADCY8P40145 1251 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 CD86P42081 329 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 SLC1A1P43005 524 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 GNPDA1P46926 289 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 HADHBP55084 474 aaKnown RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 ILF3Q12906 894 aaKnown RBP eCLIP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 QPCTQ16769 361 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 NPNTQ6UXI9 565 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 ZNF438Q7Z4V0 828 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 CLEC14AQ86T13 490 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 TRIM74Q86UV6 250 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 NRSN1Q8IZ57 195 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 COX14Q96I36 57 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 TRIB3Q96RU7 358 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 WDR24Q96S15 920 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 AGAP2Q99490 1192 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 GSDMCQ9BYG8 508 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 FOXP3Q9BZS1 431 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 SUDS3Q9H7L9 328 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 TAAR2Q9P1P5 351 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 LRIT1Q9P2V4 623 aa12.42□□□□□ -0.42
CPSF4-208ENST00000452047 FASNP49327 2511 aaKnown RBP12.42□□□□□ -0.42
CPSF4-208ENST00000452047 C1orf232A0A0U1RR37 186 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 PYGLP06737 847 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 COMTP21964 271 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 RBMS1P29558 406 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 CDKN2BP42772 138 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 INHBCP55103 352 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 MAZP56270 477 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 CTBSQ01459 385 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 AP1B1Q10567 949 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 NR1D2Q14995 579 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 PDK1Q15118 436 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 TAZQ16635 292 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 DOK6Q6PKX4 331 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 SLC30A9Q6PML9 568 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 RHOT1Q8IXI2 618 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 Q8N9G6 341 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 ZDHHC1Q8WTX9 485 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 TADA1Q96BN2 335 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 IMP4Q96G21 291 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 NAF1Q96HR8 494 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 RIOK2Q9BVS4 552 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms