RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CCDC187A0A096LP49 1063 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 TLX3O43711 291 aaPredicted RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 HLA-DQB2P05538 268 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 CCKBRP32239 447 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 NOP2P46087 812 aaKnown RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 AP1B1Q10567 949 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 HLTFQ14527 1009 aaKnown RBP eCLIP15.97■□□□□ 0.15
SGCE-208ENST00000450385 COL28A1Q2UY09 1125 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 DENND2CQ68D51 928 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 PDPK2PQ6A1A2 396 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 TSPAN33Q86UF1 283 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 PDZD3Q86UT5 571 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 RCOR2Q8IZ40 523 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 KYQ8NBH2 561 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 LSM14AQ8ND56 463 aaKnown RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 MRFAP1L1Q96HT8 127 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 COX14Q96I36 57 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 VAT1Q99536 393 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 DPYSL5Q9BPU6 564 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 B3GNT4Q9C0J1 378 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 LRRN3Q9H3W5 708 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 DPEP2Q9H4A9 486 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 CAAP1Q9H8G2 361 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 CARS2Q9HA77 564 aaKnown RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 MAGEE1Q9HCI5 957 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 MRPL40Q9NQ50 206 aaKnown RBP15.97■□□□□ 0.15
SGCE-208ENST00000450385 PKD2L2Q9NZM6 624 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 VPS18Q9P253 973 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 ALG6Q9Y672 507 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 LOC400499M0QZD8 3231 aa15.97■□□□□ 0.15
SGCE-208ENST00000450385 CACNA1GO43497 2377 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 GPR89AB7ZAQ6 455 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 NOBOXO60393 691 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 ZNF189O75820 626 aaPredicted RBP15.96■□□□□ 0.15
SGCE-208ENST00000450385 ZRANB2O95218 330 aaKnown RBP eCLIP15.96■□□□□ 0.15
SGCE-208ENST00000450385 CELA2BP08218 269 aaPredicted RBP15.96■□□□□ 0.15
SGCE-208ENST00000450385 GPR89BP0CG08 455 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CTPS1P17812 591 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 COMTP21964 271 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CDKN2BP42772 138 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 SPINT3P49223 89 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 COPS2P61201 443 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 SKOR1P84550 965 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 NIPAL4Q0D2K0 466 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 NR1D2Q14995 579 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 KIF26BQ2KJY2 2108 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 TEX44Q53QW1 395 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 TFDP3Q5H9I0 405 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CCDC70Q6NSX1 233 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CPNE8Q86YQ8 564 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 TMTC1Q8IUR5 882 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 KATNAL2Q8IYT4 538 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CNTD1Q8N815 330 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 CCDC74AQ96AQ1 378 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 TADA1Q96BN2 335 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 SIRPGQ9P1W8 387 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 LRIT1Q9P2V4 623 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 NFKBIL1Q9UBC1 381 aaPredicted RBP15.96■□□□□ 0.15
SGCE-208ENST00000450385 MOSPD1Q9UJG1 213 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 SUFUQ9UMX1 484 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 EFR3BQ9Y2G0 817 aa15.96■□□□□ 0.15
SGCE-208ENST00000450385 KCNK1O00180 336 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 IPO7O95373 1038 aaKnown RBP15.95■□□□□ 0.14
SGCE-208ENST00000450385 EPOP01588 193 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 KRT1P04264 644 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 MPOP05164 745 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 MMP2P08253 660 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 CD86P42081 329 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 SQSTM1Q13501 440 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 IHHQ14623 411 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 QPCTQ16769 361 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 BROXQ5VW32 411 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 C11orf63Q6NUN7 778 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 C19orf48Q6RUI8 117 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 ZNF438Q7Z4V0 828 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 RFX6Q8HWS3 928 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 CCNJLQ8IV13 435 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 PELI3Q8N2H9 469 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 TFB1MQ8WVM0 346 aaKnown RBP15.95■□□□□ 0.14
SGCE-208ENST00000450385 RBM41Q96IZ5 413 aaKnown RBP15.95■□□□□ 0.14
SGCE-208ENST00000450385 FAM83DQ9H4H8 585 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 ASCL3Q9NQ33 180 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
SGCE-208ENST00000450385 SATB2Q9UPW6 733 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 PCDHA13Q9Y5I0 950 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 PTPRQQ9UMZ3 2332 aa15.95■□□□□ 0.14
SGCE-208ENST00000450385 C1orf232A0A0U1RR37 186 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 GOLGA6CA6NDK9 693 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 GOLGA6BA6NDN3 693 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 BTNL10A8MVZ5 291 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 CDRT15L2A8MXV6 281 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 HACD1B0YJ81 288 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 D6RAR5 112 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 MAP3K6O95382 1288 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 CLDN7O95471 211 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 SOD1P00441 154 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 FGF1P05230 155 aa15.94■□□□□ 0.14
SGCE-208ENST00000450385 ITGA2BP08514 1039 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms