RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 RPLP0P05388 317 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 TPM1P09493 284 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 CD86P42081 329 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 GPR1P46091 355 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 RPL26P61254 145 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 QPCTQ16769 361 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 MFSD7Q6UXD7 560 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 SPRED1Q7Z699 444 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 CNGA4Q8IV77 575 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 NDUFAF2Q8N183 169 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 CCNYQ8ND76 341 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 WDR36Q8NI36 951 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 AP2M1Q96CW1 435 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 EID2BQ96D98 161 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 GFM1Q96RP9 751 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 TRIB3Q96RU7 358 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 DPEP2Q9H4A9 486 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 RPL26L1Q9UNX3 145 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 PLEKHM1Q9Y4G2 1056 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 TTLL3Q9Y4R7 772 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 HEY1Q9Y5J3 304 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 PCYT1BQ9Y5K3 369 aaPredicted RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 ANKRD66B4E2M5 251 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 APOL1O14791 398 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 NUDT21O43809 227 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 LCA5LO95447 670 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 KRT1P04264 644 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 COMTP21964 271 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 CCKBRP32239 447 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 ADCY8P40145 1251 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 SLC1A1P43005 524 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 GNPDA1P46926 289 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 EPHB1P54762 984 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 MAZP56270 477 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 CTBSQ01459 385 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 ADCY2Q08462 1091 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 NR1D2Q14995 579 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 HENMT1Q5T8I9 393 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 ZNF438Q7Z4V0 828 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 CLEC14AQ86T13 490 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 RHOT1Q8IXI2 618 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 NRSN1Q8IZ57 195 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 NAGSQ8N159 534 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 LPCAT1Q8NF37 534 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 IMP4Q96G21 291 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 RIOK2Q9BVS4 552 aaKnown RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 GSDMCQ9BYG8 508 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 CEP41Q9BYV8 373 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 FOXP3Q9BZS1 431 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 SYNDIG1Q9H7V2 258 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 THSD1Q9NS62 852 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 LRIT1Q9P2V4 623 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 DNPEPQ9ULA0 475 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 ATXN7L1Q9ULK2 861 aaPredicted RBP12.3□□□□□ -0.44
MSH5-209ENST00000450148 TMEM98Q9Y2Y6 226 aa12.3□□□□□ -0.44
MSH5-209ENST00000450148 GOLGA6CA6NDK9 693 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 GOLGA6BA6NDN3 693 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 FADS2P1A8MWK0 482 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 B4GAT1O43505 415 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 DNAJC6O75061 913 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 GOLGA6DP0CG33 693 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 KRT10P13645 584 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 CDKN2BP42772 138 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 SPINT3P49223 89 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 ILF3Q12906 894 aaKnown RBP eCLIP12.29□□□□□ -0.448e-7■■□□□ 11.6
MSH5-209ENST00000450148 PDK1Q15118 436 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 PYCR3Q53H96 274 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 B4GALNT4Q76KP1 1039 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 ARL14Q8N4G2 192 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 ZDHHC1Q8WTX9 485 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 NAF1Q96HR8 494 aaKnown RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 ZNF830Q96NB3 372 aaPredicted RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 MLPHQ9BV36 600 aaPredicted RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 SUDS3Q9H7L9 328 aaPredicted RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
MSH5-209ENST00000450148 GOLGA6AQ9NYA3 693 aa12.29□□□□□ -0.44
MSH5-209ENST00000450148 TFR2Q9UP52 801 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms