RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 GRB7Q14451 532 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 PTPRNQ16849 979 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 SPATA2LQ8IUW3 424 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 TAGAPQ8N103 731 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 STX19Q8N4C7 294 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 MAGED4Q96JG8 741 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 GAD1Q99259 594 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 NUAK2Q9H093 628 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 GMPPBQ9Y5P6 360 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 NUP98P52948 1817 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 EVPLLA8MZ36 301 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 ENPP3O14638 875 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 ARHGEF9O43307 516 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 MYCP01106 439 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 GRK3P35626 688 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 SPANXN2Q5MJ10 180 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 AKAP14Q86UN6 197 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 HIPK1Q86Z02 1210 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 HS3ST5Q8IZT8 346 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 HM13Q8TCT9 377 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 FAM193BQ96PV7 902 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 PDE10AQ9Y233 779 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 OXTRP30559 389 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 HOXD12P35452 270 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 CLCQ05315 142 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 MAPKAPK3Q16644 382 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 DALRD3Q5D0E6 543 aaKnown RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 TIFABQ6ZNK6 161 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 MOB2Q70IA6 237 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 CMTR2Q8IYT2 770 aaKnown RBP12.38□□□□□ -0.43
UBE3B-204ENST00000449510 TBC1D21Q8IYX1 336 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
UBE3B-204ENST00000449510 H3BMQ9 156 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 OXSR1O95747 527 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ANGPTL1O95841 491 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CASP9P55211 416 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PABPC1LQ4VXU2 614 aaKnown RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF621Q6ZSS3 439 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ERMP1Q7Z2K6 904 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 GPR180Q86V85 440 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ZDHHC17Q8IUH5 632 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 Q8N9G6 341 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 LRRC58Q96CX6 371 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 COG8Q96MW5 612 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ARIH2O95376 493 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CYP3A5P20815 502 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 RUNX1T1Q06455 604 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 C10orf120Q5SQS8 335 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SLC2A7Q6PXP3 512 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 OR2T12Q8NG77 320 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 LPPQ93052 612 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 TMBIM1Q969X1 311 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PLK2Q9NYY3 685 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 HSFX1Q9UBD0 423 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PSME2Q9UL46 239 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF214Q9UL59 606 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 A0A087X1B8 175 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 F9P00740 461 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CD247P20963 164 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 KCNA5P22460 613 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 IL12AP29459 219 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CD300CQ08708 224 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 TRIM32Q13049 653 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 CPSF6Q16630 551 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF789Q5FWF6 425 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 PRMT9Q6P2P2 845 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 C7orf57Q8NEG2 295 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.37□□□□□ -0.432e-12■■■■■ 49
UBE3B-204ENST00000449510 FCRL2Q96LA5 508 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SENP8Q96LD8 212 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms