RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
RBM39-218ENST00000449489 GOLGA6L3A6NEY3 463 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 E5RJQ4 531 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 KRIT1O00522 736 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 POLR1CO15160 346 aaPredicted RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.244e-12■□□□□ 11.3
RBM39-218ENST00000449489 ECEL1O95672 775 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 F9P00740 461 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 FURINP09958 794 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 EPB41P11171 864 aaKnown RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 SYT1P21579 422 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 ITGA3P26006 1051 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 CSF2RBP32927 897 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 CXCR3P49682 368 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 ST13P50502 369 aaKnown RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 NDST2P52849 883 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 MAZP56270 477 aaKnown RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 GNA12Q03113 381 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 RAD51Q06609 339 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 CUL4AQ13619 759 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 ERV3-1Q14264 604 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 TAF5Q15542 800 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 TCEA2Q15560 299 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 ZXDCQ2QGD7 858 aaPredicted RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 NADK2Q4G0N4 442 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 KCTD16Q68DU8 428 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 SPNS3Q6ZMD2 512 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 NRROSQ86YC3 692 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 OR7D4Q8NG98 312 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 THAP4Q8WY91 577 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 PGAP3Q96FM1 320 aaPredicted RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 PAGE5Q96GU1 130 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 SPON2Q9BUD6 331 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 GSDMCQ9BYG8 508 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 TM6SF2Q9BZW4 377 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 SIK2Q9H0K1 926 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 WDCPQ9H6R7 721 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 METTL14Q9HCE5 456 aaKnown RBP7.32□□□□□ -1.24
RBM39-218ENST00000449489 ZNF451Q9Y4E5 1061 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
RBM39-218ENST00000449489 NSD1Q96L73 2696 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 TSPAN11A1L157 253 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 ZSCAN5CA6NGD5 496 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 CETN3O15182 167 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 PPM1DO15297 605 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 SLC16A3O15427 465 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 MED7O43513 233 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 DPM1O60762 260 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 CREG1O75629 220 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 CEACAM4O75871 244 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 GKP32189 559 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 DLSTP36957 453 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 FASLGP48023 281 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 GCNT1Q02742 428 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 ILF3Q12906 894 aaKnown RBP eCLIP7.31□□□□□ -1.241e-8■■■■□ 21.2
RBM39-218ENST00000449489 TESK1Q15569 626 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 INO80DQ53TQ3 878 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 RESP18Q5W5W9 173 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 SP5Q6BEB4 398 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 JMJD6Q6NYC1 403 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 NXPE4Q6UWF7 544 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 TFAP2DQ7Z6R9 452 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 MCEMP1Q8IX19 187 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 TP53INP2Q8IXH6 220 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 GRAMD1CQ8IYS0 662 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 RYBPQ8N488 228 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 TMEM102Q8N9M5 508 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 Q8NA96 180 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 ZNF397Q8NF99 534 aaPredicted RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 CCL4L1Q8NHW4 92 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 CASKIN2Q8WXE0 1202 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 NT5C3BQ969T7 300 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 PNPLA2Q96AD5 504 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 HMCESQ96FZ2 354 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 NSUN5Q96P11 429 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 NT5C1BQ96P26 610 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 WRAP53Q9BUR4 548 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 SLC25A23Q9BV35 468 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 UNKQ9C0B0 810 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 TTYH3Q9C0H2 523 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 TKTL2Q9H0I9 626 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 SLAMF7Q9NQ25 335 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 FRRS1LQ9P0K9 344 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 TAAR2Q9P1P5 351 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 PPARGC1AQ9UBK2 798 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 USP25Q9UHP3 1055 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 MRPS18BQ9Y676 258 aaKnown RBP7.31□□□□□ -1.24
RBM39-218ENST00000449489 FER1L5A0AVI2 2057 aa7.31□□□□□ -1.24
RBM39-218ENST00000449489 SYNJ2BP-COX16A0A087WUM0 186 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 PRSS38A1L453 326 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 C21orf140B9A014 251 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 I6L893 689 aaPredicted RBP7.3□□□□□ -1.24
RBM39-218ENST00000449489 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
RBM39-218ENST00000449489 ANKRD34CP0C6C1 535 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 ITIH2P19823 946 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 NFKBIAP25963 317 aa7.3□□□□□ -1.24
RBM39-218ENST00000449489 PTGER4P35408 488 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms