RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 HID1Q8IV36 788 aa25■■□□□ 1.59
HTATSF1-203ENST00000448450 PHACTR4Q8IZ21 702 aa25■■□□□ 1.59
HTATSF1-203ENST00000448450 LMX1AQ8TE12 382 aa25■■□□□ 1.59
HTATSF1-203ENST00000448450 SLC39A7Q92504 469 aa25■■□□□ 1.59
HTATSF1-203ENST00000448450 FUBP1Q96AE4 644 aaKnown RBP25■■□□□ 1.59
HTATSF1-203ENST00000448450 PRORYQ9H606 182 aa25■■□□□ 1.59
HTATSF1-203ENST00000448450 PSMD11O00231 422 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 SCAMP1O15126 338 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 ATXN7O15265 892 aaPredicted RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 SIGLEC6O43699 453 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 PPARDQ03181 441 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 CDK18Q07002 472 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 TCEA2Q15560 299 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 PRRT3Q5FWE3 981 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 ESRP1Q6NXG1 681 aaKnown RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 DARS2Q6PI48 645 aaKnown RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 TECPR1Q7Z6L1 1165 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 ZNF548Q8NEK5 533 aaPredicted RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 SNIP1Q8TAD8 396 aaKnown RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 TADA1Q96BN2 335 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 WDR92Q96MX6 357 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 FCRL3Q96P31 734 aaPredicted RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 SLC13A1Q9BZW2 595 aa24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 APOBEC3BQ9UH17 382 aaKnown RBP24.99■■□□□ 1.59
HTATSF1-203ENST00000448450 C1orf232A0A0U1RR37 186 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 CACNB4O00305 520 aaPredicted RBP24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 PRB1P04280 392 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 PIRTP0C851 137 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 RBP3P10745 1247 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 ALG11Q2TAA5 492 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 HS1BP3Q53T59 392 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 BTN2A2Q8WVV5 523 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 TRIB3Q96RU7 358 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 VAT1Q99536 393 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 LGR4Q9BXB1 951 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 ABCG8Q9H221 673 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 WDR26Q9H7D7 661 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 KCTD5Q9NXV2 234 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 KLQ9UEF7 1012 aa24.98■■□□□ 1.59
HTATSF1-203ENST00000448450 MGAQ8IWI9 3026 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 GOLGA6L9A6NEM1 432 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 NEMP2A6NFY4 417 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 AQP9O43315 295 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 GIMD1P0DJR0 217 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 ZNF30P17039 623 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 TRIM23P36406 574 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 STC1P52823 247 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 SRP54P61011 504 aaKnown RBP24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 KCTD16Q68DU8 428 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 RAET1GQ6H3X3 334 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 CCDC70Q6NSX1 233 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 CDKL3Q8IVW4 592 aaPredicted RBP24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 OR4C6Q8NH72 309 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 SCAMP4Q969E2 229 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 AP2M1Q96CW1 435 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 SPASTQ9UBP0 616 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 FAM153AQ9UHL3 310 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 RSPH14Q9UHP6 348 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 MOSPD1Q9UJG1 213 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 TRHDEQ9UKU6 1024 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 DNPEPQ9ULA0 475 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 CLCA2Q9UQC9 943 aa24.97■■□□□ 1.59
HTATSF1-203ENST00000448450 ATMQ13315 3056 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 TCRBV7S2A1N4TA0A589 114 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 TMEM202A6NGA9 273 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 KCNN4O15554 427 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 BRINP1O60477 761 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 GCATO75600 419 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 MYF5P13349 255 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 ACP1P24666 158 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 CDKN3Q16667 212 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 CACTIN-AS1Q8N1I8 211 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 ATL2Q8NHH9 583 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 FGF11Q92914 225 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 LYSMD1Q96S90 227 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 FERMT1Q9BQL6 677 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 MRPL40Q9NQ50 206 aaKnown RBP24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 SHOC2Q9UQ13 582 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 PPP2R2CQ9Y2T4 447 aa24.96■■□□□ 1.59
HTATSF1-203ENST00000448450 RASGRP1O95267 797 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 NDST3O95803 873 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 ALPPL2P10696 532 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 CTSEP14091 401 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 TSHRP16473 764 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 ACTN2P35609 894 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 GPR1P46091 355 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 HK3P52790 923 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 WNT3AP56704 352 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 KIAA1024LP59773 190 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 SLC14A2Q15849 920 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 DEFB133Q30KQ1 61 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 PROX2Q3B8N5 592 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 KDELC1Q6UW63 502 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 LYSMD3Q7Z3D4 306 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 HEATR4Q86WZ0 1026 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 LSM14AQ8ND56 463 aaKnown RBP24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 OR1E3Q8WZA6 343 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 OXNAD1Q96HP4 312 aaPredicted RBP24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 FCRL5Q96RD9 977 aa24.95■■□□□ 1.58
HTATSF1-203ENST00000448450 LRRC61Q9BV99 259 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms