RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 AP4E1Q9UPM8 1137 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 PDE10AQ9Y233 779 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 PCDHGA8Q9Y5G5 932 aa19.18■□□□□ 0.66
HMGA1-205ENST00000447654 FAM149AA5PLN7 773 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 MIPP30301 263 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 GJA5P36382 358 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 OR3A3P47888 321 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PRIM2P49643 509 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 GP2P55259 537 aaKnown RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 YIF1BQ5BJH7 314 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 NDUFAF5Q5TEU4 345 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 STEAP3Q658P3 488 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PLD6Q8N2A8 252 aaKnown RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PLD5Q8N7P1 536 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 SEPT1Q8WYJ6 367 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 AURKBQ96GD4 344 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 GPR20Q99678 358 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 C2orf49Q9BVC5 232 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF717Q9BY31 904 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 ASPSCR1Q9BZE9 553 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 C12orf4Q9NQ89 552 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 DDX28Q9NUL7 540 aaKnown RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 NUP50Q9UKX7 468 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 KCNH4Q9UQ05 1017 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 OR5K3A6NET4 321 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 NPHS1O60500 1241 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 SNX4O95219 450 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 HPRP00739 348 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 APOA1P02647 267 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 GFAPP14136 432 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PCMT1P22061 227 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 BNC1Q01954 994 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF45Q02386 682 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PSMD5Q16401 504 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 ADPRMQ3LIE5 342 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 CYP4A22Q5TCH4 519 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 GPAT2Q6NUI2 795 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PNCKQ6P2M8 343 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 KDM1BQ8NB78 822 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 SLC39A13Q96H72 371 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 BDH2Q9BUT1 245 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 ACE2Q9BYF1 805 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 SLIRPQ9GZT3 109 aaKnown RBP19.17■□□□□ 0.66
HMGA1-205ENST00000447654 LRRC4Q9HBW1 653 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PDGFCQ9NRA1 345 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 PSAT1Q9Y617 370 aa19.17■□□□□ 0.66
HMGA1-205ENST00000447654 DNAJC25-GNG10A0A024R161 153 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 A0A096LPK6 155 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 WDR27A2RRH5 827 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 H0YCG3 227 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ARHGAP33O14559 1287 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 LTFP02788 710 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 HTR3AP46098 478 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 CARTPTQ16568 116 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 C6orf141Q5SZD1 244 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 CCBE1Q6UXH8 406 aaPredicted RBP19.16■□□□□ 0.66
HMGA1-205ENST00000447654 OTOP3Q7RTS5 596 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 KIAA0319LQ8IZA0 1049 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 SLC2A14Q8TDB8 520 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 PPP1R36Q96LQ0 422 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 RIPOR3Q96MK2 946 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 GDF15Q99988 308 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 EIF2B3Q9NR50 452 aaKnown RBP19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ASNSD1Q9NWL6 643 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 DTLQ9NZJ0 730 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 DNAH12Q6ZR08 3092 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 H0Y858 1186 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ERVH48-1M5A8F1 160 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 CXCL11O14625 94 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 B4GAT1O43505 415 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 MSCO60682 206 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 TGFB3P10600 412 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 DDX5P17844 614 aaKnown RBP19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ACVR2AP27037 513 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ALDH3A2P51648 485 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 CDH6P55285 790 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 AGKQ53H12 422 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 SPANXN3Q5MJ09 141 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.16■□□□□ 0.66
HMGA1-205ENST00000447654 GLRX5Q86SX6 157 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 UBQLNLQ8IYU4 475 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 MINDY1Q8N5J2 469 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 HMGCLL1Q8TB92 370 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 SLC22A17Q8WUG5 538 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 GLMNQ92990 594 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 KCTD14Q9BQ13 255 aaPredicted RBP19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ADNPQ9H2P0 1102 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 TLR9Q9NR96 1032 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 NRBP2Q9NSY0 501 aa19.16■□□□□ 0.66
HMGA1-205ENST00000447654 ZNF487B1APH4 448 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 APOL1O14791 398 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 DDHD2O94830 711 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 HTR1AP08908 422 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 NAT2P11245 290 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 SHMT2P34897 504 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 RACK1P63244 317 aaKnown RBP19.15■□□□□ 0.66
HMGA1-205ENST00000447654 GEN1Q17RS7 908 aa19.15■□□□□ 0.66
HMGA1-205ENST00000447654 C5orf22Q49AR2 442 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms