RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TNKS2Q9H2K2 1166 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 TNFRSF12AQ9NP84 129 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 HACD3Q9P035 362 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 PLA2G4CQ9UP65 541 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 LZTS1Q9Y250 596 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 H7C0S8 307 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 TLL1O43897 1013 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 OR1I1O60431 355 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 SERPINB5P36952 375 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 CTSOP43234 321 aaPredicted RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 LBX1P52954 281 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 OR4D1Q15615 310 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 PDCD2Q16342 344 aaPredicted RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 LSM12Q3MHD2 195 aaKnown RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 SH2D4BQ5SQS7 431 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 ABCB8Q9NUT2 735 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 IL17CQ9P0M4 197 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 VTI1BQ9UEU0 232 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 PEX11AO75192 247 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 ENTPD5O75356 428 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 RHOBTB1O94844 696 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 CPOXP36551 454 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 EPHA5P54756 1037 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 XIAPP98170 497 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 SULT2A1Q06520 285 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 TEAD2Q15562 447 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 PTPRNQ16849 979 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 SLC5A9Q2M3M2 681 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 ZRANB3Q5FWF4 1079 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 PAQR3Q6TCH7 311 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 FRMD7Q6ZUT3 714 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 SPPL3Q8TCT6 385 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 RPL10LQ96L21 214 aaKnown RBP17.4■□□□□ 0.38
SMC6-206ENST00000446852 GALPQ9UBC7 116 aa17.4■□□□□ 0.38
SMC6-206ENST00000446852 PFKLP17858 780 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 HLA-FP30511 346 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 PGM1P36871 562 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 STK19P49842 368 aaPredicted RBP17.39■□□□□ 0.37
SMC6-206ENST00000446852 METTL21CQ5VZV1 264 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 SLC22A9Q8IVM8 553 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 EXT2Q93063 718 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 VOPP1Q96AW1 172 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 C17orf80Q9BSJ5 609 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 MMADHCQ9H3L0 296 aaPredicted RBP17.39■□□□□ 0.37
SMC6-206ENST00000446852 GSTO2Q9H4Y5 243 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 MAGEE1Q9HCI5 957 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 TAS2R13Q9NYV9 303 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 GTSE1Q9NYZ3 720 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.39■□□□□ 0.37
SMC6-206ENST00000446852 SLCO1B7G3V0H7 640 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 CCND1P24385 295 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 HMGCLP35914 325 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 TTPAP49638 278 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 CTSL3PQ5NE16 218 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 WASHC2DQ5SRD0 308 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 TMEM25Q86YD3 366 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 USP13Q92995 863 aaPredicted RBP17.39■□□□□ 0.37
SMC6-206ENST00000446852 SLC30A3Q99726 388 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 GPR63Q9BZJ6 419 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 CCDC68Q9H2F9 335 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 IKZF3Q9UKT9 509 aa17.39■□□□□ 0.37
SMC6-206ENST00000446852 RPL26L1Q9UNX3 145 aaKnown RBP17.39■□□□□ 0.37
SMC6-206ENST00000446852 HTRA2O43464 458 aaPredicted RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 CD1EP15812 388 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 IMPDH1P20839 514 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 IRS1P35568 1242 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 NFKB2Q00653 900 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 BCL2L1Q07817 233 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 E2F5Q15329 346 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 PITRM1Q5JRX3 1037 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 FAM219BQ5XKK7 198 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 L3HYPDHQ96EM0 354 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 ATOH8Q96SQ7 321 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 GPR21Q99679 349 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 C1orf21Q9H246 121 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 NKX1-2Q9UD57 310 aaPredicted RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 TRANK1O15050 2925 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 RANBP2P49792 3224 aaKnown RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 F8W8V4 182 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 UBFD1O14562 309 aaKnown RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 NIPSNAP2O75323 286 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 CYBBP04839 570 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 SRCP12931 536 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 MTHFD2P13995 350 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 CSNK1DP48730 415 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 KLF10Q13118 480 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 CAMK1Q14012 370 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 NAA25Q14CX7 972 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 FUT11Q495W5 492 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 ZNF678Q5SXM1 525 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 STON2Q8WXE9 905 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms