RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LVRNQ6Q4G3 990 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 ADAMTSL4Q6UY14 1074 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 GLT6D1Q7Z4J2 308 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TECPR1Q7Z6L1 1165 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 GLRX5Q86SX6 157 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SLC22A18ASQ8N1D0 253 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 CBARPQ8N350 705 aaPredicted RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 SLC25A41Q8N5S1 370 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 DEFB124Q8NES8 71 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 MRGPRX2Q96LB1 330 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PLEKHG4BQ96PX9 1271 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 C19orf43Q9BQ61 176 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TBL1YQ9BQ87 522 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 FICDQ9BVA6 458 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 NLGN3Q9NZ94 848 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 NFKBIL1Q9UBC1 381 aaPredicted RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 MOSPD1Q9UJG1 213 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PCOLCE2Q9UKZ9 415 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 WDFY4Q6ZS81 3184 aa12.21□□□□□ -0.45
LTBR-204ENST00000444814 CTAGE9A4FU28 777 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 GPR89AB7ZAQ6 455 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 ENC1O14682 589 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 TPP1O14773 563 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 STX7O15400 261 aaKnown RBP12.21□□□□□ -0.46
LTBR-204ENST00000444814 AQP9O43315 295 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 C1SP09871 688 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 GPR89BP0CG08 455 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 DGKAP23743 735 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 HMGCLP35914 325 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 HK3P52790 923 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 SARNPP82979 210 aaKnown RBP12.21□□□□□ -0.46
LTBR-204ENST00000444814 CDK3Q00526 305 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 IL9RQ01113 521 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 LYSMD3Q7Z3D4 306 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 HEATR4Q86WZ0 1026 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 HID1Q8IV36 788 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 BLOC1S5Q8TDH9 187 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 C1orf54Q8WWF1 131 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 OXNAD1Q96HP4 312 aaPredicted RBP12.21□□□□□ -0.46
LTBR-204ENST00000444814 HIC2Q96JB3 615 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 RUNDC3BQ96NL0 473 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 SPATA16Q9BXB7 569 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 TEX101Q9BY14 249 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 ZCCHC2Q9C0B9 1178 aaKnown RBP12.21□□□□□ -0.46
LTBR-204ENST00000444814 ABCG8Q9H221 673 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 RMI1Q9H9A7 625 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 R3HDM2Q9Y2K5 976 aaKnown RBP12.21□□□□□ -0.46
LTBR-204ENST00000444814 DGKBQ9Y6T7 804 aa12.21□□□□□ -0.46
LTBR-204ENST00000444814 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 PI4KAP42356 2102 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SCAMP1O15126 338 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ZW10O43264 779 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SLC4A1P02730 911 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 CXCR5P32302 372 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 HADHAP40939 763 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 PAFAH1B1P43034 410 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 DAB2P98082 770 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
LTBR-204ENST00000444814 ILKQ13418 452 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SNX1Q13596 522 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ITGA9Q13797 1035 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 OASLQ15646 514 aaKnown RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 PRAMEF14Q5SWL7 426 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ZCCHC8Q6NZY4 707 aaKnown RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 PPP1R21Q6ZMI0 780 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 GATAD2AQ86YP4 633 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 RASGEF1CQ8N431 466 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 TRAM1L1Q8N609 369 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 OR4C6Q8NH72 309 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ACTRT1Q8TDG2 376 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 LMX1AQ8TE12 382 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 CNDP2Q96KP4 475 aaKnown RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 RIOK2Q9BVS4 552 aaKnown RBP12.2□□□□□ -0.46
LTBR-204ENST00000444814 GSDMCQ9BYG8 508 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 C10orf88Q9H8K7 445 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 APPL1Q9UKG1 709 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SNX12Q9UMY4 172 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 SHOC2Q9UQ13 582 aa12.2□□□□□ -0.46
LTBR-204ENST00000444814 TCRBV7S2A1N4TA0A589 114 aa12.19□□□□□ -0.46
LTBR-204ENST00000444814 GOLGA8CPA6NN73 597 aa12.19□□□□□ -0.46
LTBR-204ENST00000444814 F5H423 210 aaPredicted RBP12.19□□□□□ -0.46
LTBR-204ENST00000444814 SDC3O75056 442 aa12.19□□□□□ -0.46
LTBR-204ENST00000444814 ASMTLO95671 621 aa12.19□□□□□ -0.46
LTBR-204ENST00000444814 AP2A1O95782 977 aa12.19□□□□□ -0.46
LTBR-204ENST00000444814 ATXN1LP0C7T5 689 aaKnown RBP12.19□□□□□ -0.46
LTBR-204ENST00000444814 LPOP22079 712 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms