RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 YPEL5P62699 121 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 CDK3Q00526 305 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 SEMA5AQ13591 1074 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ARHGEF7Q14155 803 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 KHDC1Q4VXA5 237 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 PARGQ86W56 976 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 HEATR4Q86WZ0 1026 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 TSACCQ96A04 125 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 CCDC97Q96F63 343 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 IFT43Q96FT9 208 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 COX14Q96I36 57 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 TBL1YQ9BQ87 522 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 LRRC61Q9BV99 259 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 RIOK2Q9BVS4 552 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 C1QTNF7Q9BXJ2 289 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ADGRE3Q9BY15 652 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ZFYVE1Q9HBF4 777 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 IL17CQ9P0M4 197 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 ARL5AQ9Y689 179 aa12.8□□□□□ -0.36
PDLIM2-212ENST00000443561 GOLGA4Q13439 2230 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 TRIM38O00635 465 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ANXA9O76027 345 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 KCNK5O95279 499 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 IFNB1P01574 187 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 CEACAM5P06731 702 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 HOXC4P09017 264 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 TSHRP16473 764 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ATXN3P54252 364 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 DCDC1P59894 354 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 SLC14A1Q13336 389 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 NLRP8Q86W28 1048 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 SFTPA2Q8IWL1 248 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 ZNF548Q8NEK5 533 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 AP2M1Q96CW1 435 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 BPIFA1Q9NP55 256 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 DNAJC28Q9NX36 388 aa12.79□□□□□ -0.36
PDLIM2-212ENST00000443561 TOR1BO14657 336 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 LDB2O43679 373 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 STK10O94804 968 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 SUN1O94901 812 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 HMGCLP35914 325 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 COILP38432 576 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 POLD2P49005 469 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 PUM1Q14671 1186 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 TCEA2Q15560 299 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 ZNF648Q5T619 568 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 RAET1GQ6H3X3 334 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 OR52K1Q8NGK4 314 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 OR13C4Q8NGS5 318 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 CCL4L1Q8NHW4 92 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 SCARF2Q96GP6 870 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 NAPGQ99747 312 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 FSD1LQ9BXM9 530 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 WDR26Q9H7D7 661 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 RP1P56715 2156 aa12.78□□□□□ -0.36
PDLIM2-212ENST00000443561 SPAARA0A1B0GVQ0 90 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 CCL22O00626 93 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 INPP4BO15327 924 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 FLRT2O43155 660 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 DFNA5O60443 496 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 MAGEC1O60732 1142 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PHF2O75151 1096 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 TMEM63AO94886 807 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 MYF5P13349 255 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 JUNDP17535 347 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 TPH1P17752 444 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PSMA3P25788 255 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PTGIRP43119 386 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 HK3P52790 923 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 THOP1P52888 689 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 XIAPP98170 497 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 C1orf61Q13536 156 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 ANKRD22Q5VYY1 191 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
PDLIM2-212ENST00000443561 ENPP7Q6UWV6 458 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms