RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 ZNF696Q9H7X3 374 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 PDE11AQ9HCR9 933 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 RARRES3Q9UL19 164 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 CBLCQ9ULV8 474 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 RNF6Q9Y252 685 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 PCM1Q15154 2024 aa7.11□□□□□ -1.27
SSXP3-201ENST00000442971 TENM3Q9P273 2699 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 K7ENM7 598 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 TOX3O15405 576 aaPredicted RBP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 CPNE3O75131 537 aaKnown RBP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 TNNC2P02585 160 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 C9P02748 559 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 GARTP22102 1010 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 GFERP55789 205 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 GUCA2AQ02747 115 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 AIMP2Q13155 320 aaKnown RBP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 PEX6Q13608 980 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 DPY19L3Q6ZPD9 716 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 PAQR7Q86WK9 346 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 UNC45BQ8IWX7 931 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 ZSWIM2Q8NEG5 633 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 THAP3Q8WTV1 239 aaPredicted RBP7.1□□□□□ -1.27
SSXP3-201ENST00000442971 HDAC10Q969S8 669 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 ARHGEF26Q96DR7 871 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 PIP5K1AQ99755 562 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 BEX2Q9BXY8 128 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 FAM49BQ9NUQ9 324 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 INTS13Q9NVM9 706 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 P4HTMQ9NXG6 502 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 PTGFRNQ9P2B2 879 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 PCDHGC3Q9UN70 934 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 NUP210LQ5VU65 1888 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 MPDZO75970 2070 aa7.1□□□□□ -1.27
SSXP3-201ENST00000442971 TRBV23OR9-2A0A075B6M9 112 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 TRAV17A0A0B4J275 112 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 K7ERQ8 282 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 CACNB4O00305 520 aaPredicted RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 DEXIO95424 95 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 MT-CO1P00395 513 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 CST3P01034 146 aaPredicted RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 CAPN1P07384 714 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 PVRP15151 417 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 ABOP16442 354 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 KELP23276 732 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 KIAA1024LP59773 190 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 TUBB3Q13509 450 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 SSPNQ14714 243 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 POSTNQ15063 836 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 LINC00696Q6ZRV3 163 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 FGD2Q7Z6J4 655 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 C12orf29Q8N999 325 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 SLC38A9Q8NBW4 561 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 CXorf40AQ8TE69 158 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 RNF139Q8WU17 664 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 SAAL1Q96ER3 474 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 ALG14Q96F25 216 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 PERPQ96FX8 193 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 MMTAG2Q9BU76 263 aaKnown RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 TKTL2Q9H0I9 626 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 XYLT2Q9H1B5 865 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 SUDS3Q9H7L9 328 aaPredicted RBP7.09□□□□□ -1.27
SSXP3-201ENST00000442971 MTMR6Q9Y217 621 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 HS3ST2Q9Y278 367 aa7.09□□□□□ -1.27
SSXP3-201ENST00000442971 PRSS38A1L453 326 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MBD3L4A6NDZ8 208 aaPredicted RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MBD3L5A6NJ08 208 aaPredicted RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 C16orf96A6NNT2 1141 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MEN1O00255 615 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 AREL1O15033 823 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 RASSF9O75901 435 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 STAU1O95793 577 aaKnown RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 TSPAN12O95859 305 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 IGLV3-27P01718 113 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 EPHA4P54764 986 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 GSDMDP57764 484 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 NFATC2Q13469 925 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 DAZAP2Q15038 168 aaPredicted RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 DUOXA2Q1HG44 320 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MYLK3Q32MK0 819 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 KRTCAP3Q53RY4 240 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 IRAK1BP1Q5VVH5 260 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 BPHLQ86WA6 291 aaPredicted RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MARVELD2Q8N4S9 558 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 SLC37A2Q8TED4 501 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 FUBP1Q96AE4 644 aaKnown RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 VOPP1Q96AW1 172 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 PPP1R9BQ96SB3 815 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MAP3K3Q99759 626 aa7.08□□□□□ -1.28
SSXP3-201ENST00000442971 MLPHQ9BV36 600 aaPredicted RBP7.08□□□□□ -1.28
SSXP3-201ENST00000442971 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms