RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 NEU1Q99519 415 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
UBA52-202ENST00000442744 HEPHQ9BQS7 1158 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 TRIM15Q9C019 465 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 SP140LQ9H930 580 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 MAGEF1Q9HAY2 307 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
UBA52-202ENST00000442744 KCNN3Q9UGI6 736 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
UBA52-202ENST00000442744 TRAV20A0A0B4J274 112 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 GRID2IPA4D2P6 1211 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 TGFAP01135 160 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 POMCP01189 267 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 ZNF865P0CJ78 1059 aaPredicted RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 PCSK2P16519 638 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 RGS7P49802 495 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 DGKEP52429 567 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 CYP24A1Q07973 514 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 FADDQ13158 208 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 PTK6Q13882 451 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 P3H1Q32P28 736 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 DNAL1Q4LDG9 190 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 NAA35Q5VZE5 725 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 RCBTB1Q8NDN9 531 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 RAD54LQ92698 747 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 ALG14Q96F25 216 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 INPP4AQ96PE3 977 aaPredicted RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 FAM192AQ9GZU8 254 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 NEUROG2Q9H2A3 272 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 TMEM245Q9H330 911 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 CNIH4Q9P003 139 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 KCNK7Q9Y2U2 307 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 B8ZZF3 427 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 GPX5O75715 221 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 KRT16P08779 473 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 NR1D1P20393 614 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 GSTT1P30711 240 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 CDK8P49336 464 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SERPINB9P50453 376 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 GLO1Q04760 184 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 RRP1BQ14684 758 aaKnown RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 KCNAB1Q14722 419 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 MEP1BQ16820 701 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 ZNF829Q3KNS6 432 aaPredicted RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 DAB2IPQ5VWQ8 1189 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 METTL21CQ5VZV1 264 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 CNKSR3Q6P9H4 555 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SCUBE1Q8IWY4 988 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 IFT20Q8IY31 132 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 TRAPPC9Q96Q05 1148 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 TMEM8AQ9HCN3 771 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 DMAP1Q9NPF5 467 aaPredicted RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 LNPEPQ9UIQ6 1025 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SLC9A8Q9Y2E8 581 aa10.72□□□□□ -0.69
UBA52-202ENST00000442744 SAMHD1Q9Y3Z3 626 aaKnown RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
UBA52-202ENST00000442744 C2orf92A0A1B0GVN3 265 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 RASGRF2O14827 1237 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ZNF821O75541 412 aaPredicted RBP10.71□□□□□ -0.69
UBA52-202ENST00000442744 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
UBA52-202ENST00000442744 PTPN3P26045 913 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 GCGRP47871 477 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 CLCNKBP51801 687 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 SF3A3Q12874 501 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■□□□ 13.6
UBA52-202ENST00000442744 SLC9C1Q4G0N8 1177 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 BCL7AQ4VC05 210 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ZCWPW2Q504Y3 356 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ETFRF1Q6IPR1 90 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ERN2Q76MJ5 926 aaKnown RBP10.71□□□□□ -0.69
UBA52-202ENST00000442744 MAGEC3Q8TD91 643 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 DNAJC19Q96DA6 116 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ANKRD27Q96NW4 1050 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 MS4A5Q9H3V2 200 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 RUBCNLQ9H714 662 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 METTL7AQ9H8H3 244 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 PPANQ9NQ55 473 aaKnown RBP10.71□□□□□ -0.69
UBA52-202ENST00000442744 TNFRSF10DQ9UBN6 386 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 GGA2Q9UJY4 613 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ERGIC3Q9Y282 383 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 C22orf46C9J442 243 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 KCNK3O14649 394 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 EFSO43281 561 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 SNAPINO95295 136 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 BMP2P12643 396 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 LAMP2P13473 410 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 VCLP18206 1134 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 GNA11P29992 359 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ECHS1P30084 290 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 TM4SF1P30408 202 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ICAM3P32942 547 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 TIE1P35590 1138 aa10.71□□□□□ -0.69
UBA52-202ENST00000442744 ALDH6A1Q02252 535 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms