RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SNTG2Q9NY99 539 aa20.27■□□□□ 0.83
SHOX2-203ENST00000441443 TMEM98Q9Y2Y6 226 aa20.27■□□□□ 0.83
SHOX2-203ENST00000441443 PDHXO00330 501 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 AXIN1O15169 862 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 GPIP06744 558 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 JUNBP17275 347 aaPredicted RBP20.26■□□□□ 0.83
SHOX2-203ENST00000441443 GSK3BP49841 420 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ZNF484Q5JVG2 852 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 HFE2Q6ZVN8 426 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 MINDY1Q8N5J2 469 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 IPMKQ8NFU5 416 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ZFP90Q8TF47 636 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 RNF145Q96MT1 663 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.26■□□□□ 0.83
SHOX2-203ENST00000441443 DNMT3BQ9UBC3 853 aaKnown RBP20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ANAPC2Q9UJX6 822 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ABCB7O75027 752 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 FCGR1AP12314 374 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 ARCN1P48444 511 aaKnown RBP20.26■□□□□ 0.83
SHOX2-203ENST00000441443 RABGGTBP53611 331 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 FRA10AC1Q70Z53 315 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 INTS10Q9NVR2 710 aaKnown RBP20.26■□□□□ 0.83
SHOX2-203ENST00000441443 KLK14Q9P0G3 267 aa20.26■□□□□ 0.83
SHOX2-203ENST00000441443 A0A087X1B8 175 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 H3BMM5 538 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 KPNA6O60684 536 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 MYO1DO94832 1006 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 CASP2P42575 452 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 CARTPTQ16568 116 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 INAVAQ3KP66 663 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 PRAMEF19Q5SWL8 479 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 SPARTQ8N0X7 666 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 ANKRD49Q8WVL7 239 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 VPS33AQ96AX1 596 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 C18orf25Q96B23 403 aaPredicted RBP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 TMEM74Q96NL1 305 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 ALG2Q9H553 416 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 BBIP1A8MTZ0 92 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 TSPAN1O60635 241 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 AKAP5P24588 427 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 HTR1BP28222 390 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 KCNC1P48547 511 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 PCYT1AP49585 367 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 KPNA2P52292 529 aaKnown RBP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 SF3B4Q15427 424 aaKnown RBP eCLIP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 GRIK4Q16099 956 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 PCID2Q5JVF3 399 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 ARHGAP17Q68EM7 881 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 TEKT5Q96M29 485 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 ZMAT2Q96NC0 199 aaKnown RBP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 ALG9Q9H6U8 611 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 HMG20AQ9NP66 347 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 MRPL42Q9Y6G3 142 aaKnown RBP20.25■□□□□ 0.83
SHOX2-203ENST00000441443 BRCA2P51587 3418 aa20.25■□□□□ 0.83
SHOX2-203ENST00000441443 TCRBV5S2A0A599 114 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 PFDN6O15212 129 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 MAN1A2O60476 641 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 GSSP48637 474 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 MAPK11Q15759 364 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 IQSEC1Q6DN90 963 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 PDZD4Q76G19 769 aaPredicted RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 CATSPER4Q7RTX7 472 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 FKBP10Q96AY3 582 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 CCDC97Q96F63 343 aaPredicted RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 OSMRQ99650 979 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 KCTD14Q9BQ13 255 aaPredicted RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 CHID1Q9BWS9 393 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 FBXO5Q9UKT4 447 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 DNAJC15Q9Y5T4 150 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 PCNAP12004 261 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TPTEP56180 551 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TUBA3CQ13748 450 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 THOC7Q6I9Y2 204 aaKnown RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 PRMT9Q6P2P2 845 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 MIER2Q8N344 545 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 SLC22A17Q8WUG5 538 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 ZNF641Q96N77 438 aaPredicted RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 MTRRQ9UBK8 725 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TCF3P15923 654 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 CRHBPP24387 322 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 DNAJB1P25685 340 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TKTP29401 623 aaKnown RBP20.24■□□□□ 0.83
SHOX2-203ENST00000441443 ADRA1BP35368 520 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 FOXA1P55317 472 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 LIPEQ05469 1076 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 RPS6KA2Q15349 733 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 AGAP9Q5VTM2 703 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 SLC16A12Q6ZSM3 486 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 SLCO6A1Q86UG4 719 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 CNTN4Q8IWV2 1026 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 NPY6RQ99463 290 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 C16orf70Q9BSU1 422 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TPK1Q9H3S4 243 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 KLQ9UEF7 1012 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 TRHDEQ9UKU6 1024 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 PCDHA9Q9Y5H5 950 aa20.24■□□□□ 0.83
SHOX2-203ENST00000441443 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
SHOX2-203ENST00000441443 TBC1D21Q8IYX1 336 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms