RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SLC30A9Q6PML9 568 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 ADAMTSL4Q6UY14 1074 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 TSPAN33Q86UF1 283 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 SGF29Q96ES7 293 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 SCARF2Q96GP6 870 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-219ENST00000440240 NUP85Q9BW27 656 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 CDH19Q9H159 772 aa20.68■□□□□ 0.9
CPNE1-219ENST00000440240 AGRPO00253 132 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 HGSO14964 777 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-219ENST00000440240 FZD6O60353 706 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 PDHA1P08559 390 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 ZNF30P17039 623 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 ETV5P41161 510 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 SSR1P43307 286 aaKnown RBP20.67■□□□□ 0.9
CPNE1-219ENST00000440240 POLD2P49005 469 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 TPM4P67936 248 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 PTPRRQ15256 657 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 MANEAQ5SRI9 462 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 TIGD7Q6NT04 549 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-219ENST00000440240 FAM71BQ8TC56 605 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 AP2M1Q96CW1 435 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 IQCDQ96DY2 449 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 BTBD6Q96KE9 485 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 ABCG8Q9H221 673 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 AMACRQ9UHK6 382 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 DNPEPQ9ULA0 475 aa20.67■□□□□ 0.9
CPNE1-219ENST00000440240 ASH1LQ9NR48 2969 aaKnown RBP20.67■□□□□ 0.9
CPNE1-219ENST00000440240 MATN3O15232 486 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ITGB2P05107 769 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 CD1CP29017 333 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 GARSP41250 739 aaKnown RBP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 EPHB1P54762 984 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ZBED6P86452 979 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 PTSQ03393 145 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 SQSTM1Q13501 440 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 TRA2AQ13595 282 aaKnown RBP eCLIP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 C16orf72Q14CZ0 275 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 PAFAH1B3Q15102 231 aaKnown RBP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 LRRC66Q68CR7 880 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 CAVIN1Q6NZI2 390 aaKnown RBP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ZNF574Q6ZN55 896 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ZNF765Q7L2R6 523 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ZFAND4Q86XD8 727 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 DTX1Q86Y01 620 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 RAVER1Q8IY67 606 aaKnown RBP20.66■□□□□ 0.9
CPNE1-219ENST00000440240 NAGSQ8N159 534 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ZSCAN1Q8NBB4 408 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 FATE1Q969F0 183 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 DPYSL5Q9BPU6 564 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 CD84Q9UIB8 345 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 ST14Q9Y5Y6 855 aa20.66■□□□□ 0.9
CPNE1-219ENST00000440240 A0A087X0T9 212 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 A0A0J9YYE9 177 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 C9orf172C9J069 976 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 TRBC1P01850 177 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 FAM228BP0C875 321 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 CA4P22748 312 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 CCNCP24863 283 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 ACTR1BP42025 376 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 ACTR1AP61163 376 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 GALNT2Q10471 571 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 MMRN1Q13201 1228 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 IFI16Q16666 785 aaKnown RBP20.65■□□□□ 0.9
CPNE1-219ENST00000440240 ALKBH5Q6P6C2 394 aaKnown RBP20.65■□□□□ 0.9
CPNE1-219ENST00000440240 DOK6Q6PKX4 331 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 NRSN1Q8IZ57 195 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 EXD1Q8NHP7 514 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 PTCD2Q8WV60 388 aaKnown RBP20.65■□□□□ 0.9
CPNE1-219ENST00000440240 MAML1Q92585 1016 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 SCAMP4Q969E2 229 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 TSGA13Q96PP4 275 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 OR2M4Q96R27 311 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 NUDT22Q9BRQ3 303 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 FOXJ2Q9P0K8 574 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 CAPN11Q9UMQ6 739 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 TMEM98Q9Y2Y6 226 aa20.65■□□□□ 0.9
CPNE1-219ENST00000440240 IGHV5-10-1A0A0J9YXX1 117 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-219ENST00000440240 PPM1DO15297 605 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 SOD1P00441 154 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 CD48P09326 243 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 ARSEP51690 589 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 LIMK2P53671 638 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 UBASH3AP57075 661 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 RPL26P61254 145 aaKnown RBP20.64■□□□□ 0.89
CPNE1-219ENST00000440240 FANCCQ00597 558 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 LRP8Q14114 963 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 PYCR3Q53H96 274 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 ALG1LQ6GMV1 187 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 MAP7D3Q8IWC1 876 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 KCTD6Q8NC69 237 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 OR4D9Q8NGE8 314 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 CPLX3Q8WVH0 158 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 PATE1Q8WXA2 126 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 TAAR9Q96RI9 348 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 ARHGAP9Q9BRR9 750 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 RBM22Q9NW64 420 aaKnown RBP eCLIP20.64■□□□□ 0.891e-6■■□□□ 12.7
CPNE1-219ENST00000440240 RPL26L1Q9UNX3 145 aaKnown RBP20.64■□□□□ 0.89
CPNE1-219ENST00000440240 LUC7L2Q9Y383 392 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms