RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CLDN7O95471 211 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 ASMTLO95671 621 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 CEACAM5P06731 702 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 GLB1P16278 677 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 STC1P52823 247 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 GALNT3Q14435 633 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 PCSK7Q16549 785 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 KAZNQ674X7 775 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 SLC30A9Q6PML9 568 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 MFSD7Q6UXD7 560 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 RFLNAQ6ZTI6 216 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 BZW1Q7L1Q6 419 aaKnown RBP19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 ZNF765Q7L2R6 523 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 TECPR1Q7Z6L1 1165 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 TRIM74Q86UV6 250 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 CCNJLQ8IV13 435 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 NRSN1Q8IZ57 195 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 SCAMP4Q969E2 229 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 MLPHQ9BV36 600 aaPredicted RBP19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 RIOK2Q9BVS4 552 aaKnown RBP19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 STRADBQ9C0K7 418 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 BRD8Q9H0E9 1235 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 EPB41L5Q9HCM4 733 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 ENTPD2Q9Y5L3 495 aa19.78■□□□□ 0.76
SHROOM1-204ENST00000440118 D6RAR5 112 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 INPP4BO15327 924 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 TNNT3P45378 269 aaPredicted RBP19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 POLD2P49005 469 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 CCL7P80098 99 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 PTSQ03393 145 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 TCEAL1Q15170 157 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 LLGL1Q15334 1064 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 CERCAMQ5T4B2 595 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 ADAMTSL4Q6UY14 1074 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 MARK2Q7KZI7 788 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 NT5DC3Q86UY8 548 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 GALNT13Q8IUC8 556 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 CCDC170Q8IYT3 715 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 ZNF248Q8NDW4 579 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 GPR156Q8NFN8 814 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 ZDHHC1Q8WTX9 485 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 NAF1Q96HR8 494 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 HIC2Q96JB3 615 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 OLFM3Q96PB7 478 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 OR2M4Q96R27 311 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 GOLPH3Q9H4A6 298 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 TRNAU1APQ9NX07 287 aaKnown RBP19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 RABGEF1Q9UJ41 708 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 SLC17A4Q9Y2C5 497 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 PCDHA13Q9Y5I0 950 aa19.77■□□□□ 0.76
SHROOM1-204ENST00000440118 CCDC187A0A096LP49 1063 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 TMX2-CTNND1H3BSU7 103 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 NOBOXO60393 691 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 IVLP07476 585 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 ITPKBP27987 946 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 PPM1FP49593 454 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 NAP1L1P55209 391 aaKnown RBP19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 SKOR1P84550 965 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 IHHQ14623 411 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 QPCTQ16769 361 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 MAP9Q49MG5 647 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 CCDC70Q6NSX1 233 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 B4GALNT4Q76KP1 1039 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 KDELC2Q7Z4H8 507 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 CBARPQ8N350 705 aaPredicted RBP19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 ARL14Q8N4G2 192 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 EXD1Q8NHP7 514 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 WDR36Q8NI36 951 aaKnown RBP19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 GPBAR1Q8TDU6 330 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 FOXP3Q9BZS1 431 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 ZMYND15Q9H091 742 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 LRRN3Q9H3W5 708 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 TAAR2Q9P1P5 351 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 LRIT1Q9P2V4 623 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 TMEM98Q9Y2Y6 226 aa19.76■□□□□ 0.75
SHROOM1-204ENST00000440118 A0A0A6YYK5 440 aaPredicted RBP19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 RHPN2P1A8MT19 583 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ANKRD66B4E2M5 251 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 CASC3O15234 703 aaKnown RBP19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ZW10O43264 779 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 CST8O60676 142 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 PRLP01236 227 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 MMP2P08253 660 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 AK4P27144 223 aaPredicted RBP19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ACTR1BP42025 376 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 CDKN2BP42772 138 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 NR2C2P49116 596 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ZNF75DP51815 510 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ERVPABLB-1P60509 514 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ACTR1AP61163 376 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 TFDP3Q5H9I0 405 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 CCDC181Q5TID7 509 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 SPOCD1Q6ZMY3 1216 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 DAAM2Q86T65 1068 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 CNTD1Q8N815 330 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 TFB1MQ8WVM0 346 aaKnown RBP19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 P3H4Q92791 437 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 TMEM74Q96NL1 305 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 LYSMD1Q96S90 227 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms