RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 YY2O15391 372 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 NDST3O95803 873 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 SOD1P00441 154 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 ANXA6P08133 673 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 RBP3P10745 1247 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 CDK4P11802 303 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 GPR1P46091 355 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 CDK3Q00526 305 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 ELOCQ15369 112 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 TCEA2Q15560 299 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 SMAD1Q15797 465 aaKnown RBP23.57■■□□□ 1.36
VARS-217ENST00000440048 KDELC1Q6UW63 502 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 LYSMD3Q7Z3D4 306 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 CDKL3Q8IVW4 592 aaPredicted RBP23.57■■□□□ 1.36
VARS-217ENST00000440048 KDF1Q8NAX2 398 aaPredicted RBP23.57■■□□□ 1.36
VARS-217ENST00000440048 GATA6Q92908 595 aa23.57■■□□□ 1.36
VARS-217ENST00000440048 TMEM121BQ9BXQ6 578 aaPredicted RBP23.57■■□□□ 1.36
VARS-217ENST00000440048 ASXL3Q9C0F0 2248 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 C1QTNF9BB2RNN3 333 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 CCDC175P0C221 793 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 PIRTP0C851 137 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 C1QTNF9P0C862 333 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 SPINT3P49223 89 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 WNT3AP56704 352 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 DARS2Q6PI48 645 aaKnown RBP23.56■■□□□ 1.36
VARS-217ENST00000440048 ADAMTSL4Q6UY14 1074 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 CCNI2Q6ZMN8 369 aaPredicted RBP23.56■■□□□ 1.36
VARS-217ENST00000440048 GALNT15Q8N3T1 639 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 CCHCR1Q8TD31 782 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 OXNAD1Q96HP4 312 aaPredicted RBP23.56■■□□□ 1.36
VARS-217ENST00000440048 AGAP2Q99490 1192 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 FERMT1Q9BQL6 677 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 RIOK2Q9BVS4 552 aaKnown RBP23.56■■□□□ 1.36
VARS-217ENST00000440048 FRMD8Q9BZ67 464 aaPredicted RBP23.56■■□□□ 1.36
VARS-217ENST00000440048 USP29Q9HBJ7 922 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 MAGEE1Q9HCI5 957 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 CYP4F12Q9HCS2 524 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 RSPH14Q9UHP6 348 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 MOSPD1Q9UJG1 213 aa23.56■■□□□ 1.36
VARS-217ENST00000440048 CHD6Q8TD26 2715 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 PRSS38A1L453 326 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 PTMAP06454 111 aaKnown RBP23.55■■□□□ 1.36
VARS-217ENST00000440048 CEACAM5P06731 702 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 C6orf132Q5T0Z8 1188 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 CCDC70Q6NSX1 233 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 ZNF662Q6ZS27 426 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 MARCH9Q86YJ5 346 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 EID2BQ96D98 161 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 WDR24Q96S15 920 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 BOCQ9BWV1 1114 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 ZFYVE1Q9HBF4 777 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 PKD2L2Q9NZM6 624 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 DOLKQ9UPQ8 538 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 SHOC2Q9UQ13 582 aa23.55■■□□□ 1.36
VARS-217ENST00000440048 ASPMQ8IZT6 3477 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 LOC285095A0A1B0GVY8 99 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 RGSL1A5PLK6 1076 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 GOLGA6L9A6NEM1 432 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 KCNN4O15554 427 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 DUSP3P51452 185 aaPredicted RBP23.54■■□□□ 1.36
VARS-217ENST00000440048 CLDN6P56747 220 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 KLF1Q13351 362 aaPredicted RBP23.54■■□□□ 1.36
VARS-217ENST00000440048 LVRNQ6Q4G3 990 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 GKN2Q86XP6 184 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 SDR16C5Q8N3Y7 309 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 TTC13Q8NBP0 860 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 MRGPRX2Q96LB1 330 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 GBA3Q9H227 469 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 FAM83DQ9H4H8 585 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 LZTFL1Q9NQ48 299 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 EVA1BQ9NVM1 165 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 NCKIPSDQ9NZQ3 722 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 ZNF711Q9Y462 761 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 ACACAQ13085 2346 aa23.54■■□□□ 1.36
VARS-217ENST00000440048 MYLKQ15746 1914 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 RP1P56715 2156 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 FAM149AA5PLN7 773 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 GOLGA6L3A6NEY3 463 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 EPOP01588 193 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 FUCA1P04066 466 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 PYGLP06737 847 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 MPP3Q13368 585 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 ANKRD20A2Q5SQ80 823 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 ANKRD20A1Q5TYW2 823 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 ANKRD20A3Q5VUR7 823 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 TMC3Q7Z5M5 1100 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 TMPRSS12Q86WS5 348 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 SLC35F3Q8IY50 421 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 UBE2Q2Q8WVN8 375 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 SCG3Q8WXD2 468 aaKnown RBP23.53■■□□□ 1.36
VARS-217ENST00000440048 TMEM168Q9H0V1 697 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 SLC17A4Q9Y2C5 497 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 SPO11Q9Y5K1 396 aa23.53■■□□□ 1.36
VARS-217ENST00000440048 ARHGEF17Q96PE2 2063 aaPredicted RBP23.53■■□□□ 1.36
VARS-217ENST00000440048 DMXL2Q8TDJ6 3036 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 TCRBV7S2A1N4TA0A589 114 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 ZZEF1O43149 2961 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 NRDCO43847 1150 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 STK10O94804 968 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 POLD2P49005 469 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms