RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SPTY2D1-AS1A0A0U1RR47 76 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 ANKRD66B4E2M5 251 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 K7ESM1 405 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 YKT6O15498 198 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 TNFSF14O43557 240 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 STK10O94804 968 aaKnown RBP17.66■□□□□ 0.42
CCDC188-201ENST00000439765 ITGAVP06756 1048 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 C1SP09871 688 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 ATXN1LP0C7T5 689 aaKnown RBP17.66■□□□□ 0.42
CCDC188-201ENST00000439765 KCNJ1P48048 391 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 FNTAP49354 379 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 CDK18Q07002 472 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 SLC14A2Q15849 920 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 TTC27Q6P3X3 843 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 CCDC137Q6PK04 289 aaKnown RBP17.66■□□□□ 0.42
CCDC188-201ENST00000439765 Q6ZVL8 140 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 PELI3Q8N2H9 469 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 SAP25Q8TEE9 199 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 DTD2Q96FN9 168 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 ZNF148Q9UQR1 794 aa17.66■□□□□ 0.42
CCDC188-201ENST00000439765 DSPP15924 2871 aaKnown RBP17.66■□□□□ 0.42
CCDC188-201ENST00000439765 PSMD11O00231 422 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 CAPNS1P04632 268 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ZNF30P17039 623 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 PSMB4P28070 264 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 WNT3AP56704 352 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 BNIP3Q12983 259 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 MTM1Q13496 603 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ITPRIPL1Q6GPH6 555 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 CCNI2Q6ZMN8 369 aaPredicted RBP17.65■□□□□ 0.42
CCDC188-201ENST00000439765 RFLNAQ6ZTI6 216 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 DCP2Q8IU60 420 aaKnown RBP17.65■□□□□ 0.42
CCDC188-201ENST00000439765 KLHL7Q8IXQ5 586 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 FAM71DQ8N9W8 422 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 IPMKQ8NFU5 416 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 SPATA13Q96N96 652 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 FCRL5Q96RD9 977 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 KRT12Q99456 494 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 GORASP1Q9BQQ3 440 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 TMEM121Q9BTD3 319 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 MLPHQ9BV36 600 aaPredicted RBP17.65■□□□□ 0.42
CCDC188-201ENST00000439765 BPTFQ12830 3046 aa17.65■□□□□ 0.42
CCDC188-201ENST00000439765 CLDN7O95471 211 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 NDST3O95803 873 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 RXRGP48443 463 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 STC1P52823 247 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 YPEL5P62699 121 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 PTSQ03393 145 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 ESRP1Q6NXG1 681 aaKnown RBP17.64■□□□□ 0.41
CCDC188-201ENST00000439765 KDELC1Q6UW63 502 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 MACC1Q6ZN28 852 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 TMPRSS7Q7RTY8 843 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 LYSMD3Q7Z3D4 306 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 LYSMD1Q96S90 227 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 FSD1LQ9BXM9 530 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 USP29Q9HBJ7 922 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 PCYOX1Q9UHG3 505 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 FEZ2Q9UHY8 353 aaPredicted RBP17.64■□□□□ 0.41
CCDC188-201ENST00000439765 KLF15Q9UIH9 416 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 PNMA8BQ9ULN7 279 aaPredicted RBP17.64■□□□□ 0.41
CCDC188-201ENST00000439765 ZNF106Q9H2Y7 1883 aaKnown RBP17.64■□□□□ 0.41
CCDC188-201ENST00000439765 ADAMTS20P59510 1910 aa17.64■□□□□ 0.41
CCDC188-201ENST00000439765 SRRM3A6NNA2 597 aaPredicted RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 CACNA1GO43497 2377 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 STIP1P31948 543 aaKnown RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 CHRNA4P43681 627 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 TNNT3P45378 269 aaPredicted RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 GDF10P55107 478 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 EIF2B5Q13144 721 aaKnown RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 NFATC4Q14934 902 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 RAET1GQ6H3X3 334 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 RBFAQ8N0V3 343 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 MMGT1Q8N4V1 131 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 MRGPRX2Q96LB1 330 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 RUNDC3BQ96NL0 473 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 APOOQ9BUR5 198 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 WDR26Q9H7D7 661 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 UCKL1Q9NWZ5 548 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 SHOC2Q9UQ13 582 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 TOR1BO14657 336 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 FFAR2O15552 330 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 ZNF189O75820 626 aaPredicted RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 PIAS2O75928 621 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
CCDC188-201ENST00000439765 MPP3Q13368 585 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 TCEA2Q15560 299 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 CDKN3Q16667 212 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 SIRPB2Q5JXA9 342 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 CCDC70Q6NSX1 233 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 PNCKQ6P2M8 343 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 KANSL1Q7Z3B3 1105 aa17.63■□□□□ 0.41
CCDC188-201ENST00000439765 TECPR1Q7Z6L1 1165 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms