RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C6orf62Q9GZU0 229 aaPredicted RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 LHPPQ9H008 270 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 R3HDMLQ9H3Y0 253 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 GLOD4Q9HC38 313 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 HPS4Q9NQG7 708 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 TMEM181Q9P2C4 612 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CPA4Q9UI42 421 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 DOCK5Q9H7D0 1870 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 KANSL1LA0AUZ9 987 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 DCLK1O15075 740 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 KRT75O95678 551 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 HMBSP08397 361 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ZNF484Q5JVG2 852 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 MAMDC4Q6UXC1 1216 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 THAP5Q7Z6K1 395 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CDYL2Q8N8U2 506 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 OR10Q1Q8NGQ4 319 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 SGCDQ92629 289 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ACOX2Q99424 681 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 MIR1-1HGQ9H1L0 117 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 CD274Q9NZQ7 290 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 ACTR3BQ9P1U1 418 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 TRIP11Q15643 1979 aa9.04□□□□□ -0.96
COPB1-202ENST00000439561 GREB1LQ9C091 1923 aaPredicted RBP9.04□□□□□ -0.96
COPB1-202ENST00000439561 ZBTB42B2RXF5 422 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 H0Y626 953 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 TRIM16O95361 564 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SEC24AO95486 1093 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CST1P01037 141 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 GPIP06744 558 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ALDOCP09972 364 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 PRKACGP22612 351 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 FOXA1P55317 472 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MRPS15P82914 257 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PTPRCAPQ14761 206 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 NR6A1Q15406 480 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 IQSEC1Q6DN90 963 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 FAM45BPQ6NSW5 357 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SLC27A1Q6PCB7 646 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CCDC80Q76M96 950 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MILR1Q7Z6M3 343 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MFSD6LQ8IWD5 586 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CDC26Q8NHZ8 85 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 FAM45AQ8TCE6 357 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SNX19Q92543 992 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MAGED4Q96JG8 741 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 NPY6RQ99463 290 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 RIBC2Q9H4K1 309 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CD320Q9NPF0 282 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 NME7Q9Y5B8 376 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 BBIP1A8MTZ0 92 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 H0Y858 1186 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MYO1DO94832 1006 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 OXSR1O95747 527 aaPredicted RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 GRM5P41594 1212 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MAGEA12P43365 314 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SLC26A2P50443 739 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CLCN5P51795 746 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ATP6V0D1P61421 351 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 GSTM4Q03013 218 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 DCAF4L1Q3SXM0 396 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SLC36A3Q495N2 470 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 TECRLQ5HYJ1 363 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 FRA10AC1Q70Z53 315 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PAGE2Q7Z2X7 111 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ALDH16A1Q8IZ83 802 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PACRGLQ8N7B6 248 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CENPIQ92674 756 aaPredicted RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 TMBIM1Q969X1 311 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 BIRC7Q96CA5 298 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 KIFC1Q9BW19 673 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SEZ6LQ9BYH1 1024 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MARCH7Q9H992 704 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 MEAF6Q9HAF1 191 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 LTB4R2Q9NPC1 389 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ENTPD7Q9NQZ7 604 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ANGPTL3Q9Y5C1 460 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 EP400Q96L91 3159 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ASB14A6NK59 587 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 G3V2T6 193 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PSMD11O00231 422 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 RASAL1O95294 804 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SLC6A2P23975 617 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 FMO4P31512 558 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 GGT5P36269 586 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SERPINH1P50454 418 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 UFM1P61960 85 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SH3BP2P78314 561 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 DAB2P98082 770 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms