RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 MYO1CO00159 1063 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 NPHS1O60500 1241 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 VPS26AO75436 327 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 SRP72O76094 671 aaKnown RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 UBOX5O94941 541 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 PIGNO95427 931 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 HSPA4LO95757 839 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 F7P08709 466 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 ALOX15P16050 662 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 ITGALP20701 1170 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 CTSOP43234 321 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 MAGEA9P43362 315 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 STK19P49842 368 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 SF3A3Q12874 501 aaKnown RBP eCLIP15.33■□□□□ 0.04
SGCE-205ENST00000437425 PEX6Q13608 980 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 PTPRCAPQ14761 206 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 CBX2Q14781 532 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 TBCCQ15814 346 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 ZRANB3Q5FWF4 1079 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 FAM91A1Q658Y4 838 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 ZCCHC23Q6ZST2 131 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 LYSMD3Q7Z3D4 306 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 SNX20Q7Z614 316 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 NPAS3Q8IXF0 933 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 NKAPQ8N5F7 415 aaKnown RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 RHEBL1Q8TAI7 183 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 PPM1EQ8WY54 764 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 MCCC1Q96RQ3 725 aaPredicted RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 NKX2-4Q9H2Z4 354 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 CPSF2Q9P2I0 782 aaKnown RBP15.33■□□□□ 0.04
SGCE-205ENST00000437425 ZFP69BQ9UJL9 534 aa15.33■□□□□ 0.04
SGCE-205ENST00000437425 UBA6A0AVT1 1052 aaPredicted RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 CYP17A1P05093 508 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 PKMP14618 531 aaKnown RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 ZNF37AP17032 561 aaPredicted RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 ZNF7P17097 686 aaPredicted RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 HNF1BP35680 557 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 PBX2P40425 430 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 GLRBP48167 497 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 CDKN2DP55273 166 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 XIAPP98170 497 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 PFKPQ01813 784 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 PRKAA1Q13131 559 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 RCN2Q14257 317 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 SEMA3AQ14563 771 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 ZNF460Q14592 562 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 EIF4HQ15056 248 aaKnown RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 ZNF549Q6P9A3 640 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 GDPD4Q6W3E5 623 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 LDB1Q86U70 411 aaPredicted RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 OR6K2Q8NGY2 324 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 GRIN3AQ8TCU5 1115 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 KCNJ9Q92806 393 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 THOC1Q96FV9 657 aaKnown RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 CNDP1Q96KN2 507 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 HEPHQ9BQS7 1158 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 TRMOQ9BU70 441 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 TFB2MQ9H5Q4 396 aaKnown RBP15.32■□□□□ 0.04
SGCE-205ENST00000437425 RAD18Q9NS91 495 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 DNAJC28Q9NX36 388 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 HEY2Q9UBP5 337 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 VTI1BQ9UEU0 232 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 HAO1Q9UJM8 370 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 TMCO1Q9UM00 188 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 DNAJC16Q9Y2G8 782 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 RAP2CQ9Y3L5 183 aa15.32■□□□□ 0.04
SGCE-205ENST00000437425 UNC5CO95185 931 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 SLC4A1P02730 911 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 CISD3P0C7P0 127 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 CYP2A6P11509 494 aaPredicted RBP15.31■□□□□ 0.04
SGCE-205ENST00000437425 ZNF30P17039 623 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 CTPS1P17812 591 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 RPS3P23396 243 aaKnown RBP eCLIP15.31■□□□□ 0.04
SGCE-205ENST00000437425 SPAM1P38567 509 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 AQP5P55064 265 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 NFKB2Q00653 900 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 GALNT1Q10472 559 aaPredicted RBP15.31■□□□□ 0.04
SGCE-205ENST00000437425 DLG1Q12959 904 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 E2F5Q15329 346 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 CDKN3Q16667 212 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 FAM78AQ5JUQ0 283 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 DPY19L3Q6ZPD9 716 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 AFAP1L2Q8N4X5 818 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 C12orf76Q8N812 135 aaPredicted RBP15.31■□□□□ 0.04
SGCE-205ENST00000437425 DTX3LQ8TDB6 740 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 FGF13Q92913 245 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 SKA1Q96BD8 255 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 ASIC4Q96FT7 647 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 SORT1Q99523 831 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 GATA5Q9BWX5 397 aaPredicted RBP15.31■□□□□ 0.04
SGCE-205ENST00000437425 DERL2Q9GZP9 239 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 MYLK2Q9H1R3 596 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 ZDHHC6Q9H6R6 413 aa15.31■□□□□ 0.04
SGCE-205ENST00000437425 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms