RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 COL6A2P12110 1019 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 DMC1Q14565 340 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 SYCE2Q6PIF2 218 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 TSPAN33Q86UF1 283 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTPRF-207ENST00000436724 OR2A12Q8NGT7 310 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 TTC8Q8TAM2 541 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 GRIN3AQ8TCU5 1115 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 SLC2A11Q9BYW1 496 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 SUV39H2Q9H5I1 410 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 KCNK13Q9HB14 408 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 ZFYVE1Q9HBF4 777 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 A0A087X1B8 175 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 NPIPB15A6NHN6 443 aaPredicted RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 OR1I1O60431 355 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 TULP3O75386 442 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 DLDP09622 509 aaKnown RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CISD3P0C7P0 127 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 RPL26P61254 145 aaKnown RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 XIAPP98170 497 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 DBN1Q16643 649 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CDKN3Q16667 212 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 ZNF366Q8N895 744 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 LPGAT1Q92604 370 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CDCA3Q99618 268 aaPredicted RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CEP44Q9C0F1 390 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 DZANK1Q9NVP4 752 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 THAP1Q9NVV9 213 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 RPL26L1Q9UNX3 145 aaKnown RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 GOLGA8CPA6NN73 597 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 TARM1B6A8C7 271 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 ADH1CP00326 375 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 SERPINE1P05121 402 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 FMO4P31512 558 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 SLC1A6P48664 564 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 COL13A1Q5TAT6 717 aaPredicted RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 FAM45BPQ6NSW5 357 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 FAM45AQ8TCE6 357 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 SGF29Q96ES7 293 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 TSPAN17Q96FV3 270 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 MYLK2Q9H1R3 596 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 USH1CQ9Y6N9 552 aa21.06■□□□□ 0.96
PTPRF-207ENST00000436724 TNRC18O15417 2968 aaPredicted RBP21.06■□□□□ 0.96
PTPRF-207ENST00000436724 CAPN8A6NHC0 703 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 H7C0S8 307 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 NDUFS3O75489 264 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 TGDSO95455 350 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 POP4O95707 220 aaKnown RBP21.05■□□□□ 0.96
PTPRF-207ENST00000436724 KRT16P08779 473 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 MYL2P10916 166 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 SLC6A11P48066 632 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 TANGO2Q6ICL3 276 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 FAM151BQ6UXP7 276 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 FRS2Q8WU20 508 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 ECHDC3Q96DC8 303 aa21.05■□□□□ 0.96
PTPRF-207ENST00000436724 INTS10Q9NVR2 710 aaKnown RBP21.05■□□□□ 0.96
PTPRF-207ENST00000436724 HOXC11O43248 304 aaPredicted RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 FDXRP22570 491 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 FCARP24071 287 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 PTPRNQ16849 979 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 LCA5Q86VQ0 697 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 OR6Y1Q8NGX8 325 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 UBXN10Q96LJ8 280 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 TUBGCP5Q96RT8 1024 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 AARSD1Q9BTE6 412 aaKnown RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 CPEB1Q9BZB8 566 aaKnown RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 OXSMQ9NWU1 459 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 FAM50BQ9Y247 325 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 MED16Q9Y2X0 877 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 NUMBLQ9Y6R0 609 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 WISP3O95389 354 aaPredicted RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 CA5AP35218 305 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 SKIV2L2P42285 1042 aaKnown RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 GAB4Q2WGN9 574 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 NAIF1Q69YI7 327 aaPredicted RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 ZYG11AQ6WRX3 759 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 TAS2R42Q7RTR8 314 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 CRLF3Q8IUI8 442 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 NAT14Q8WUY8 206 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 CCDC97Q96F63 343 aaPredicted RBP21.04■□□□□ 0.96
PTPRF-207ENST00000436724 SORT1Q99523 831 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 TMEM120AQ9BXJ8 343 aa21.04■□□□□ 0.96
PTPRF-207ENST00000436724 GAPDHSO14556 408 aaPredicted RBP21.03■□□□□ 0.96
PTPRF-207ENST00000436724 UNC5CO95185 931 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 APOA4P06727 396 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 LTA4HP09960 611 aaKnown RBP21.03■□□□□ 0.96
PTPRF-207ENST00000436724 E2F5Q15329 346 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 FAM83EQ2M2I3 478 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 TSNAXIP1Q2TAA8 658 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 SFTPA1Q8IWL2 248 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 ETFBKMTQ8IXQ9 262 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 PPP2R3CQ969Q6 453 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 NXPE3Q969Y0 559 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 TIFAQ96CG3 184 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 KLHL32Q96NJ5 620 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 BIRC8Q96P09 236 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 FAM83CQ9BQN1 747 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 GDE1Q9NZC3 331 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 DOCK8Q8NF50 2099 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms