RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SLC30A10Q6XR72 485 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 TMPRSS11BQ86T26 416 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SLC41A1Q8IVJ1 513 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SMPDL3BQ92485 455 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 WASF3Q9UPY6 502 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 HCN1O60741 890 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SELPP16109 830 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 DDX6P26196 483 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SYVN1Q86TM6 617 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PTGR2Q8N8N7 351 aaPredicted RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 OR4L1Q8NH43 312 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SETD7Q8WTS6 366 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 EFR3BQ9Y2G0 817 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 TRPM1Q7Z4N2 1603 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 TTLL8A6PVC2 850 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 LRIG2O94898 1065 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 BPNT1O95861 308 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 FKBP1AP62942 108 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 VGLL4Q14135 290 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 LRRC32Q14392 662 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 PLA2G4EQ3MJ16 856 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF527Q8NB42 609 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 CASKIN2Q8WXE0 1202 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SEZ6LQ9BYH1 1024 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 SLC40A1Q9NP59 571 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 KCNQ5Q9NR82 932 aa11.18□□□□□ -0.62
SCN4A-201ENST00000435607 WNT10BO00744 389 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TSPAN9O75954 239 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ERCC1P07992 297 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 EIF2B2P49770 351 aaKnown RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SULT1C3Q6IMI6 304 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CHST9Q7L1S5 443 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PNLDC1Q8NA58 520 aaKnown RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 GDPD5Q8WTR4 605 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PIH1D2Q8WWB5 315 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 DPYSL5Q9BPU6 564 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SDHAF3Q9NRP4 125 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 GMEB2Q9UKD1 530 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CD2P06729 351 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PTPN2P17706 415 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CTPS1P17812 591 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CTSOP43234 321 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 RARRES1P49788 294 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 BTN3A2P78410 334 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 DGCR6Q14129 220 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 UAP1L1Q3KQV9 507 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ALG10Q5BKT4 473 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SLC30A6Q6NXT4 461 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CYP2R1Q6VVX0 501 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CADM2Q8N3J6 435 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 EXOC2Q96KP1 924 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ACAT2Q9BWD1 397 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 STOML2Q9UJZ1 356 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TTC34A8MYJ7 566 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CA12O43570 354 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 AIF1P55008 147 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SLC13A2Q13183 592 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ITPK1Q13572 414 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CES3Q6UWW8 571 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 STRADAQ7RTN6 431 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ARNTL2Q8WYA1 636 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 LINGO1Q96FE5 620 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 GPR20Q99678 358 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 C11orf84Q9BUA3 381 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 IL1RAPQ9NPH3 570 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PIGNO95427 931 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 DCTN2Q13561 401 aaKnown RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 FAM189A2Q15884 450 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ZBTB6Q15916 424 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 BROXQ5VW32 411 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 VSTM1Q6UX27 236 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF540Q8NDQ6 660 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 B3GALT6Q96L58 329 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CDRT15Q96T59 188 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TRIM39Q9HCM9 518 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 MEMO1Q9Y316 297 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF609O15014 1411 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 IDO1P14902 403 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PTPRAP18433 802 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CD52P31358 61 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 BNIP2Q12982 314 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ATP1A4Q13733 1029 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms