RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FAM234BA2RU67 622 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 URADA6NGE7 173 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 FAM25AB3EWG3 89 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 FAM25CB3EWG5 89 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 FAM25GB3EWG6 89 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 M0QYT0 321 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 EEDO75530 441 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TCF3P15923 654 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CHRNB2P17787 502 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TFEBP19484 476 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 HNRNPH1P31943 449 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CD86P42081 329 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 STT3AP46977 705 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SLC7A5Q01650 507 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 Q3C1V9 767 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 WDR45BQ5MNZ6 344 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 RBM12BQ8IXT5 1001 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CARFQ8N187 725 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PQLC1Q8N2U9 271 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 NEDD4LQ96PU5 975 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 LYSMD1Q96S90 227 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SNRNP25Q9BV90 132 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 LMAN2LQ9H0V9 348 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 NEK6Q9HC98 313 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PAPOLBQ9NRJ5 636 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 MIOSQ9NXC5 875 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DTNAQ9Y4J8 743 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SVILO95425 2214 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ABHD14A-ACY1A0A1B0GW23 586 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 KCNU1A8MYU2 1149 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 RSL1D1O76021 490 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SGPL1O95470 568 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TTC33Q6PID6 262 aaPredicted RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 GPR141Q7Z602 305 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 FAM126BQ8IXS8 530 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 C1orf52Q8N6N3 182 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 STYXQ8WUJ0 223 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CHAMP1Q96JM3 812 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PELOQ9BRX2 385 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SNX15Q9NRS6 342 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ARRDC5A6NEK1 342 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SMIM23A6NLE4 172 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 AVILO75366 819 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 UBOX5O94941 541 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 YBX3P16989 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 STAT5AP42229 794 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TMBIM6P55061 237 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ZYXQ15942 572 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ANKDD1AQ495B1 522 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CTXN3Q4LDR2 81 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CDC73Q6P1J9 531 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 OTOAQ7RTW8 1153 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CLEC14AQ86T13 490 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SLC44A2Q8IWA5 706 aaPredicted RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 MINDY1Q8N5J2 469 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PCDH20Q8N6Y1 951 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PPP1R16BQ96T49 567 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 MYLK2Q9H1R3 596 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 RDH14Q9HBH5 336 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 KLHL11Q9NVR0 708 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 GPRC5BQ9NZH0 403 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 EMC3Q9P0I2 261 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DUSP10Q9Y6W6 482 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 COL4A6Q14031 1691 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 HAS3O00219 553 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PDHXO00330 501 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PCDH17O14917 1159 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DTNBO60941 627 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CASP1P29466 404 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SLC1A6P48664 564 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 NME5P56597 212 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DAOAP59103 153 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ACVR1Q04771 509 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CNTN1Q12860 1018 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TRAM1Q15629 374 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 C5orf22Q49AR2 442 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 LDLRAP1Q5SW96 308 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DPY19L2P1Q6NXN4 242 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TMC7Q7Z402 723 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 CYP4Z2PQ8N1L4 340 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 KRT78Q8N1N4 520 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 SLC22A18Q96BI1 424 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TEFMQ96QE5 360 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 GDE1Q9NZC3 331 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ADAM29Q9UKF5 820 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 COG5Q9UP83 839 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PLXNA3P51805 1871 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TBKBP1A7MCY6 615 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 C5orf58C9J3I9 102 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 NPIPB8E9PQR5 432 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 H0Y858 1186 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 DFNA5O60443 496 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ENTPD5O75356 428 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 MYCP01106 439 aaPredicted RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 IMPDH1P20839 514 aa3.76□□□□□ -1.81
SHPRH-205ENST00000433355 PTBP1P26599 531 aaKnown RBP eCLIP3.76□□□□□ -1.815e-7■■■■□ 26.3
SHPRH-205ENST00000433355 SESN2P58004 480 aaPredicted RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 TRA2BP62995 288 aaKnown RBP3.76□□□□□ -1.81
SHPRH-205ENST00000433355 ARMC12Q5T9G4 340 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms