RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 FOXM1Q08050 763 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ACSM2AQ08AH3 577 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 Q0VFX4 171 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TMEM115Q12893 351 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 EPS8Q12929 822 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 GPS2Q13227 327 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 MAD2L1Q13257 205 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 NAE1Q13564 534 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 FGFBP1Q14512 234 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PLCB4Q15147 1175 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CTF1Q16619 201 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ZSCAN23Q3MJ62 389 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 AMZ1Q400G9 498 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 FBXO43Q4G163 708 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ATP13A5Q4VNC0 1218 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 EEF1A1P5Q5VTE0 462 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CCDC30Q5VVM6 783 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ACSM2BQ68CK6 577 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 HAUS3Q68CZ6 603 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ITPRIPL1Q6GPH6 555 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TYW3Q6IPR3 259 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 TRNP1Q6NT89 227 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 LCTLQ6UWM7 567 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 GLDNQ6ZMI3 551 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 CCNI2Q6ZMN8 369 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 Q6ZSV7 163 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 FASTKD5Q7L8L6 764 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 ADGRF2Q8IZF7 708 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ZBTB2Q8N680 514 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 MIGA1Q8NAN2 632 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CSNK2A3Q8NEV1 391 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 THAP6Q8TBB0 222 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PPP4R1Q8TF05 950 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PSPC1Q8WXF1 523 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 USP6NLQ92738 828 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 WBP2Q969T9 261 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 EVI5LQ96CN4 794 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 MMABQ96EY8 250 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 NEUROD6Q96NK8 337 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PIP5K1AQ99755 562 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 KXD1Q9BQD3 176 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PCGF1Q9BSM1 259 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TEX12Q9BXU0 123 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TM6SF1Q9BZW5 370 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ZNF556Q9HAH1 456 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PSD3Q9NYI0 1048 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ABI3Q9P2A4 366 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 INTS6Q9UL03 887 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 EXO1Q9UQ84 846 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 NFS1Q9Y697 457 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 IGLV5-37A0A075B6J1 123 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 A0A1B0GUV1 79 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 FAM237BA0A1B0GVD1 139 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 FSD2A1L4K1 749 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 DENND3A2RUS2 1198 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SRRM3A6NNA2 597 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 C15orf62A8K5M9 175 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 A8MZ25 164 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 AP3D1O14617 1153 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 MAP2K7O14733 419 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 HS3ST1O14792 307 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 LDLRAD4O15165 306 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SPINT2O43291 252 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 HS6ST1O60243 411 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 KLK8O60259 260 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 LDB3O75112 727 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 RFPL2O75678 378 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SRPRAP08240 638 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 IGHV4-30-4P0DP06 118 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 FCGR1AP12314 374 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ZNF23P17027 643 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SAT1P21673 171 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SHMT1P34896 483 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 COMPP49747 757 aaPredicted RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 MXI1P50539 228 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ARSEP51690 589 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 DRG2P55039 364 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 SORDQ00796 357 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 LMOD3Q0VAK6 560 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 CHAF1BQ13112 559 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 TDGQ13569 410 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 CUL4AQ13619 759 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 TNFAIP1Q13829 316 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 FRG1Q14331 258 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 WTAPQ15007 396 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 IZUMO4Q1ZYL8 232 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 ZNF284Q2VY69 593 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 KRTAP24-1Q3LI83 254 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 DCST1Q5T197 706 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SNX30Q5VWJ9 437 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 JADE1Q6IE81 842 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 KLHL35Q6PF15 583 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 PQLC2Q6ZP29 291 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 SEPT14Q6ZU15 432 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 CREB3L2Q70SY1 520 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 IKBIPQ70UQ0 350 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 TAOK1Q7L7X3 1001 aa2.16□□□□□ -2.06
CDC40-204ENST00000431461 CTU1Q7Z7A3 348 aaKnown RBP2.16□□□□□ -2.06
CDC40-204ENST00000431461 GALNT5Q7Z7M9 940 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms