RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CYP8B1Q9UNU6 501 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 VPS4BO75351 444 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ALADP13716 330 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 CDH13P55290 713 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 NTHL1P78549 312 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 PLOD1Q02809 727 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 RPL38P63173 70 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 STX4Q12846 297 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TPRG1Q6ZUI0 275 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 CATSPER1Q8NEC5 780 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 SLC35F5Q8WV83 523 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 MRPL57Q9BQC6 102 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ACE2Q9BYF1 805 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 PHACTR1Q9C0D0 580 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 SIX2Q9NPC8 291 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 SNX15Q9NRS6 342 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 GRIN2DO15399 1336 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TCRBV9S1A1TA0A576 114 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ALPIP09923 528 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ZNF23P17027 643 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ATP6V1B2P21281 511 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 CRATP43155 626 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 RFTN1Q14699 578 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 NDUFA9Q16795 377 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TAS1R3Q7RTX0 852 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 SIX5Q8N196 739 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TMEM132CQ8N3T6 1108 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 OSBPL6Q9BZF3 934 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 CD207Q9UJ71 328 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TMCO1Q9UM00 188 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 POLR1DQ9Y2S0 133 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 OR6A2O95222 327 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 UNGP13051 313 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 CCNHP51946 323 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 MFSD3Q96ES6 412 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TBCDQ9BTW9 1192 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 ATP6V1HQ9UI12 483 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 TCRBV21S2A2A0A5A6 115 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 NEMP2A6NFY4 417 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 CTSAP10619 480 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 EPCAMP16422 314 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 SNX30Q5VWJ9 437 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 AMZ2Q86W34 360 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 TSEN2Q8NCE0 465 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 GDF3Q9NR23 364 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 MMP20O60882 483 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PDHA1P08559 390 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PBX1P40424 430 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 RPL14P50914 215 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 TMEM164Q5U3C3 297 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 ZNF780BQ9Y6R6 833 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 TCRBV7S2A1N4TA0A589 114 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 CMPK1P30085 196 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 CHRNA4P43681 627 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PHF19Q5T6S3 580 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 HECTD2Q5U5R9 776 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 CRELD2Q6UXH1 353 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 SGK2Q9HBY8 427 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 GRIA4P48058 902 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PACS1Q6VY07 963 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 OR10T2Q8NGX3 314 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PIGKQ92643 395 aa17.04■□□□□ 0.32
SMARCA4-203ENST00000429416 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 GOT2P00505 430 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 PSMC3P17980 439 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 UBE3AQ05086 875 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 SUZ12Q15022 739 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 RIOK2Q9BVS4 552 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 PRKAB1Q9Y478 270 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 EPN2O95208 641 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 UQCRBP14927 111 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 LBPP18428 481 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 ZNF844Q08AG5 666 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 RHOJQ9H4E5 214 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 NUP98P52948 1817 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 HNRNPRO43390 633 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 GATAD2AQ86YP4 633 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 TOX2Q96NM4 488 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 HAO1Q9UJM8 370 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 GJD2Q9UKL4 321 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 REXO2Q9Y3B8 237 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 MTX2O75431 263 aa17.03■□□□□ 0.32
SMARCA4-203ENST00000429416 LRATO95237 230 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms