RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 TRIP10Q15642 601 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
THBS3-202ENST00000428962 GK5Q6ZS86 529 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 PDSS2Q86YH6 399 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 NKAPQ8N5F7 415 aaKnown RBP13.65□□□□□ -0.22
THBS3-202ENST00000428962 PNPLA1Q8N8W4 532 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
THBS3-202ENST00000428962 SCLYQ96I15 445 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 EXOC2Q96KP1 924 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 ATOH8Q96SQ7 321 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 EPS15L1Q9UBC2 864 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 RAI2Q9Y5P3 530 aa13.65□□□□□ -0.22
THBS3-202ENST00000428962 H3BNX3 289 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 UBXN8O00124 270 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 TRIM38O00635 465 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 UBFD1O14562 309 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 VPS26AO75436 327 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SEC24AO95486 1093 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SOD2P04179 222 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 FGF4P08620 206 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CD9P21926 228 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 KCNC1P48547 511 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 ACADVLP49748 655 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SGSHP51688 502 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 OR4D1Q15615 310 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 GEN1Q17RS7 908 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 AGKQ53H12 422 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 TOP1MTQ969P6 601 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 NPAS2Q99743 824 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CLSTN3Q9BQT9 956 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 TNFRSF12AQ9NP84 129 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SUCOQ9UBS9 1254 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 STOML2Q9UJZ1 356 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 ADAMTS6Q9UKP5 1117 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SUPT3HO75486 399 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 BCAS2O75934 225 aaPredicted RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 TMCC1O94876 653 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 C1RP00736 705 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 PRLP01236 227 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CD1EP15812 388 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 FMO4P31512 558 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 PSMD8P48556 350 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CEACAM7Q14002 265 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 REP15Q6BDI9 236 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CLEC6AQ6EIG7 209 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 CXorf57Q6NSI4 855 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 LARP4Q71RC2 724 aaKnown RBP eCLIP13.64□□□□□ -0.23
THBS3-202ENST00000428962 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 FBXO39Q8N4B4 442 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 UCMAQ8WVF2 138 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 VN1R3Q9BXE9 311 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 GKN1Q9NS71 199 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 SARDHQ9UL12 918 aa13.64□□□□□ -0.23
THBS3-202ENST00000428962 OAS3Q9Y6K5 1087 aaKnown RBP13.64□□□□□ -0.23
THBS3-202ENST00000428962 BBIP1A8MTZ0 92 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 H0Y626 953 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 H3BMM5 538 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 AZIN1O14977 448 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 STX7O15400 261 aaKnown RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 TSPAN3O60637 253 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 VPS4BO75351 444 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 UPP2O95045 317 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 F11P03951 625 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 MTHFD2P13995 350 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 PEX2P28328 305 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 PKNOX1P55347 436 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 CCL23P55773 120 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 PSME3P61289 254 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 ARF5P84085 180 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 LCP2Q13094 533 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 PPP1R3AQ16821 1122 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 INO80DQ53TQ3 878 aaPredicted RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 OGFRL1Q5TC84 451 aaPredicted RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 KANK2Q63ZY3 851 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 PAQR3Q6TCH7 311 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 HACD2Q6Y1H2 254 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 RNF111Q6ZNA4 994 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 EFL1Q7Z2Z2 1120 aaKnown RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 STK40Q8N2I9 435 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 BHLHE22Q8NFJ8 381 aaPredicted RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms